RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GABARAPL2P60520 117 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 EMX1Q04741 257 aaPredicted RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 RAB40BQ12829 278 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 FAPQ12884 760 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 NEDD8Q15843 81 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 CEACAM16Q2WEN9 425 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 OR2G6Q5TZ20 316 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF773Q6PK81 442 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 CORO6Q6QEF8 472 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF100Q8IYN0 542 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 SLC26A10Q8NG04 563 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 C11orf40Q8WZ69 217 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 TMEM80Q96HE8 168 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 DOCK7Q96N67 2140 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 AMELYQ99218 206 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF649Q9BS31 505 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 EXOGQ9Y2C4 368 aaKnown RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 POLEQ07864 2286 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 DHHO43323 396 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 PTHP01270 115 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 GLI4P10075 376 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 CSNK2BP67870 215 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 ROR2Q01974 943 aaKnown RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 GLO1Q04760 184 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 PMPCAQ10713 525 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 SLC35D3Q5M8T2 416 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 KCTD8Q6ZWB6 473 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 HDDC2Q7Z4H3 204 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 GPR137CQ8N3F9 429 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 CNN2Q99439 309 aaKnown RBP13.47□□□□□ -0.25
PRPF3-201ENST00000324862 HAO2Q9NYQ3 351 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 KCNG2Q9UJ96 466 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 MOKQ9UQ07 419 aa13.47□□□□□ -0.25
PRPF3-201ENST00000324862 TRGV8A0A0C4DH27 118 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 A0A1W2PQL4 384 aaPredicted RBP13.46□□□□□ -0.25
PRPF3-201ENST00000324862 AKAP8O43823 692 aaKnown RBP13.46□□□□□ -0.25
PRPF3-201ENST00000324862 KRT33AO76009 404 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 LCKP06239 509 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 PIPP12273 146 aaPredicted RBP13.46□□□□□ -0.25
PRPF3-201ENST00000324862 B4GALT1P15291 398 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 ADAM8P78325 824 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 GGTLC2Q14390 218 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 GLB1L2Q8IW92 636 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 LRRC18Q8N456 261 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 IPCEF1Q8WWN9 437 aaPredicted RBP13.46□□□□□ -0.25
PRPF3-201ENST00000324862 MYDGFQ969H8 173 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 TP63Q9H3D4 680 aaPredicted RBP13.46□□□□□ -0.25
PRPF3-201ENST00000324862 GPR35Q9HC97 309 aa13.46□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF593O00488 134 aaPredicted RBP13.45□□□□□ -0.26
PRPF3-201ENST00000324862 RAB36O95755 333 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 SPARCP09486 303 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 LIMS3P0CW19 117 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 LIMS4P0CW20 117 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 PCMT1P22061 227 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF85Q03923 595 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 HSF2Q03933 536 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 SGCAQ16586 387 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 XAF1Q6GPH4 301 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 SPATC1Q76KD6 591 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 OR5M11Q96RB7 305 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 ISG20L2Q9H9L3 353 aaKnown RBP13.45□□□□□ -0.26
PRPF3-201ENST00000324862 PARPBPQ9NWS1 579 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 RALYQ9UKM9 306 aaKnown RBP13.45□□□□□ -0.26
PRPF3-201ENST00000324862 DIMT1Q9UNQ2 313 aaKnown RBP13.45□□□□□ -0.26
PRPF3-201ENST00000324862 TFAP2AP05549 437 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 PATE4P0C8F1 98 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 LAP3P28838 519 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 TSC22D1Q15714 1073 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 IGFBP7Q16270 282 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 LCN1P1Q5VSP4 162 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 TFAP2EQ6VUC0 442 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 SLC35F2Q8IXU6 374 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 INTS14Q96SY0 518 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 TM9SF2Q99805 663 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 SH3GL3Q99963 347 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 OPN3Q9H1Y3 402 aaPredicted RBP13.45□□□□□ -0.26
PRPF3-201ENST00000324862 FGF20Q9NP95 211 aaPredicted RBP13.45□□□□□ -0.26
PRPF3-201ENST00000324862 UPB1Q9UBR1 384 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 OSGIN2Q9Y236 505 aa13.45□□□□□ -0.26
PRPF3-201ENST00000324862 COL12A1Q99715 3063 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 A0A096LPE4 126 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 A0A1W2PPZ6 126 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 AHCYL1O43865 530 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 TMIGD3P0DMS9 266 aaPredicted RBP13.44□□□□□ -0.26
PRPF3-201ENST00000324862 C10orf128Q5T292 105 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 DNM1P34Q6PK57 102 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 STARD4Q96DR4 205 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 WBP1Q96G27 269 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 ACOT13Q9NPJ3 140 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 ERVK13-1Q9NX77 482 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms