RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MZT1Q08AG7 82 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MSMO1Q15800 293 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 BAK1Q16611 211 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 LYSMD4Q5XG99 296 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 KCNJ15Q99712 375 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 APOOQ9BUR5 198 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 C1GALT1Q9NS00 363 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RNF186Q9NXI6 227 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 EGFP01133 1207 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RAB40ALP0C0E4 278 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC6A8P48029 635 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 EDDM3BP56851 147 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC46A3Q7Z3Q1 461 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MAVSQ7Z434 540 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MDGA1Q8NFP4 955 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RAB40AQ8WXH6 277 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TANKQ92844 425 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 AMDHD1Q96NU7 426 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TAF9BQ9HBM6 251 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 PIGBOS1A0A0B4J2F0 54 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 HOXC11O43248 304 aaPredicted RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 SEMG1P04279 462 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 INHBCP55103 352 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MRPL2Q5T653 305 aaKnown RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 Q6ZTK2 550 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TAS1R1Q7RTX1 841 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC35F3Q8IY50 421 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 C15orf54Q8N8G6 183 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 OR4N2Q8NGD1 307 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ADAMTS18Q8TE60 1221 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MUCL1Q96DR8 90 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RSRP1Q9BUV0 290 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 OR52D1Q9H346 318 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CHRNA9Q9UGM1 479 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 DUSP13Q9UII6 198 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ZNF728P0DKX0 622 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 OTPQ5XKR4 325 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 VWA1Q6PCB0 445 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 MAGT1Q9H0U3 335 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 PRSS38A1L453 326 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ZNF320A2RRD8 509 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TMEM212A6NML5 194 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 AQP8O94778 261 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 OR8U8P0C7N1 319 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 HTR2CP28335 458 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CTSCP53634 463 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 WNT7BP56706 349 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TCTE3Q8IZS6 198 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 UBAC2Q8NBM4 344 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 STEAP1Q9UHE8 339 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CYB5R1Q9UHQ9 305 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 GRPP07492 148 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR5AS1Q8N127 324 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 C1orf198Q9H425 327 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SLC22A11Q9NSA0 550 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TAS2R4Q9NYW5 299 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR2A25A4D2G3 310 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 UBE2G2P60604 165 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR51H1Q8NH63 302 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TIMM29Q9BSF4 260 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 C16orf70Q9BSU1 422 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 MRPS28Q9Y2Q9 187 aaKnown RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 LOC100289279A0A1B0GTE1 492 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 CPMP14384 443 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 ACKR3P25106 362 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 FCGR2CP31995 323 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SNCAP37840 140 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 RPS19P39019 145 aaKnown RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 SNRPNP63162 240 aaKnown RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 MOB1BQ7L9L4 216 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SPNS2Q8IVW8 549 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OR1M1Q8NGA1 313 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 NMES1Q9C002 83 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 FAM96BQ9Y3D0 163 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 MYO16Q9Y6X6 1858 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 MON2Q7Z3U7 1717 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 C10orf71Q711Q0 1435 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 OTOGLQ3ZCN5 2332 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 ZCWPW2A0A1B0GU75 182 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TRIM77I1YAP6 450 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 BCAT2O15382 392 aaPredicted RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 MRPL33O75394 65 aaKnown RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 AIFM1O95831 613 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 TFAP2AP05549 437 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 H2AFB1P0C5Y9 115 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 SLC25A6P12236 298 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 CTSL3PQ5NE16 218 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 ZNF684Q5T5D7 378 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 KIAA1958Q8N8K9 716 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 CMTM2Q8TAZ6 248 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 DHRS4Q9BTZ2 278 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 C20orf27Q9GZN8 174 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 HEYLQ9NQ87 328 aaPredicted RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 PHRF1Q9P1Y6 1649 aaKnown RBP7.29□□□□□ -1.24
CIITA-201ENST00000324288 NUP188Q5SRE5 1749 aa7.29□□□□□ -1.24
CIITA-201ENST00000324288 RNASET2O00584 256 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms