RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SYPP08247 313 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 PUDPQ08623 228 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 CAMK2DQ13557 499 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 RAB11BQ15907 218 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 SHISA6Q6ZSJ9 500 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 CATSPERDQ86XM0 798 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 NFAM1Q8NET5 270 aaPredicted RBP20.1■□□□□ 0.81
PNKP-201ENST00000322344 OR52N5Q8NH56 324 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 MFSD8Q8NHS3 518 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 MS4A3Q96HJ5 214 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 RADILQ96JH8 1075 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 ZNF436Q9C0F3 470 aaPredicted RBP20.1■□□□□ 0.81
PNKP-201ENST00000322344 SLC23A1Q9UHI7 598 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 FLVCR2Q9UPI3 526 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 DHDHQ9UQ10 334 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 IGHV3-20A0A0C4DH32 117 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 H7C417 338 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 ERVH48-1M5A8F1 160 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 SOX1O00570 391 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 ARPC1BO15143 372 aaKnown RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 CD2P06729 351 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 HEXBP07686 556 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 DAP3P51398 398 aaKnown RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 MECP2P51608 486 aaKnown RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 MELKQ14680 651 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 TOMM20Q15388 145 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 SEZ6L2Q6UXD5 910 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 APCDD1LQ8NCL9 501 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 FOXN4Q96NZ1 517 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 BEX1Q9HBH7 125 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 MTFP1Q9UDX5 166 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 PPIEQ9UNP9 301 aaKnown RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 SLC22A13Q9Y226 551 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 GGT3PA6NGU5 568 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 H0YC42 278 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 CTAG2O75638 210 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 NDUFB6O95139 128 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 IL5P05113 134 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 TPOP07202 933 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 TMIGD3P0DMS9 266 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 NAGAP17050 411 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 DNASE1P24855 282 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 DCTDP32321 178 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 ARRB1P49407 418 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 ETFDHQ16134 617 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 GLDNQ6ZMI3 551 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 OR11H4Q8NGC9 324 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 OR51D1Q8NGF3 324 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 ASB10Q8WXI3 467 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 GPN1Q9HCN4 374 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 CKLFQ9UBR5 152 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 GTF2A1LQ9UNN4 478 aa20.09■□□□□ 0.81
PNKP-201ENST00000322344 COA3Q9Y2R0 106 aaPredicted RBP20.09■□□□□ 0.81
PNKP-201ENST00000322344 LOC100289279A0A1B0GTE1 492 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 ZNF208O43345 1280 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 ICMTO60725 284 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 PNPP00491 289 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 CSF1P09603 554 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 PNLIPP16233 465 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 ZNF823P16415 610 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 PTGS2P35354 604 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 PER3P56645 1201 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 ZP1P60852 638 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 NPDC1Q9NQX5 325 aaPredicted RBP20.08■□□□□ 0.8
PNKP-201ENST00000322344 LRP12Q9Y561 859 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 SPAG17Q6Q759 2223 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 CPAMD8Q8IZJ3 1885 aa20.08■□□□□ 0.8
PNKP-201ENST00000322344 NPIPA5E9PKD4 350 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 MS4A18H0YCH9 400 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 ALOX12BO75342 701 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 PTHLHP12272 177 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 CPN1P15169 458 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 FSTP19883 344 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 POU3F4P49335 361 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 MAP2K6P52564 334 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 FBXW4P57775 412 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 SQSTM1Q13501 440 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 MS4A18Q3C1V0 323 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 LINC00303Q3SY05 128 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 NKAIN1Q4KMZ8 207 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 ZBTB37Q5TC79 503 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 GLT8D1Q68CQ7 371 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 OR7E24Q6IFN5 339 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 H1FNTQ75WM6 255 aaPredicted RBP20.07■□□□□ 0.8
PNKP-201ENST00000322344 NDUFAF7Q7L592 441 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 SPICQ8N5J4 248 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 OR8H1Q8NGG4 311 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 FAM3DQ96BQ1 224 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 B3GNT2Q9NY97 397 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 SUSD2Q9UGT4 822 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 ELF5Q9UKW6 265 aaPredicted RBP20.07■□□□□ 0.8
PNKP-201ENST00000322344 NPIPA1Q9UND3 350 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 R4GMQ9 66 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 ADAMTS20P59510 1910 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 SNRPGP15A8MWD9 76 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 TSC22D2O75157 780 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 IFNGR1P15260 489 aa20.07■□□□□ 0.8
PNKP-201ENST00000322344 MFGE8Q08431 387 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms