RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GALK2Q01415 458 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 EGR3Q06889 387 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PUDPQ08623 228 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 RASGEF1BQ0VAM2 473 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PCGF3Q3KNV8 242 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 LAMTOR1Q6IAA8 161 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF574Q6ZN55 896 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 BTN2A1Q7KYR7 527 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PLCZ1Q86YW0 608 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 TMEM234Q8WY98 164 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 HLA-CQ95604 372 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 GTPBP2Q9BX10 602 aaKnown RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 AKIRIN1Q9H9L7 192 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 COPZ2Q9P299 210 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PLPP3O14495 311 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PEX14O75381 377 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 CFIP05156 583 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 AP3S2P59780 193 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 SPOCK1Q08629 439 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 HACD4Q5VWC8 232 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 KCTD18Q6PI47 426 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 COX15Q7KZN9 410 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF679Q8IYX0 411 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 HAVCR1Q96D42 359 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 OR2M2Q96R28 347 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 CRB3Q9BUF7 120 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 ATG5Q9H1Y0 275 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 METTL17Q9H7H0 456 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 C7orf66A4D0T2 115 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ITGA5P08648 1049 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 RAD52P43351 418 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF81P51508 661 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 FOXF1Q12946 379 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 CARD17Q5XLA6 110 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 OR10K2Q6IF99 312 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF627Q7L945 461 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 DCXRQ7Z4W1 244 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 FGD2Q7Z6J4 655 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 LRRTM1Q86UE6 522 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.38□□□□□ -0.75
PTPN2-201ENST00000309660 MEIOBQ8N635 442 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 APCDD1LQ8NCL9 501 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 OR11H4Q8NGC9 324 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 DVL3Q92997 716 aaPredicted RBP10.38□□□□□ -0.75
PTPN2-201ENST00000309660 MIB2Q96AX9 1013 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 CHRNA10Q9GZZ6 450 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 IRF2BPLQ9H1B7 796 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 METTL7AQ9H8H3 244 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 NOX3Q9HBY0 568 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 GPR171O14626 319 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 OR2T1O43869 369 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ALOX12BO75342 701 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF254O75437 659 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 RAB40ALP0C0E4 278 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 DNASE1P24855 282 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 OC90Q02509 493 aaPredicted RBP10.38□□□□□ -0.75
PTPN2-201ENST00000309660 LINC00303Q3SY05 128 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 Q6ZTK2 550 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ANKRD37Q7Z713 158 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 OR11G2Q8NGC1 345 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 RAB40AQ8WXH6 277 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 SLC25A44Q96H78 314 aaPredicted RBP10.38□□□□□ -0.75
PTPN2-201ENST00000309660 SEC61A2Q9H9S3 476 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 PPP4R1LQ9P1A2 415 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 RARRES3Q9UL19 164 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 SRPK3Q9UPE1 567 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 POLR1DQ9Y2S0 133 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 A0A1W2PQD3 144 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 ACOT7O00154 380 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 SMAD9O15198 467 aaKnown RBP10.38□□□□□ -0.75
PTPN2-201ENST00000309660 CD1AP06126 327 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 CD2P06729 351 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 SFTPDP35247 375 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 DNASE1L1P49184 302 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 CCL7P80098 99 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 FOXK1P85037 733 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 C19orf57Q0VDD7 668 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 PRAMEF20Q5VT98 475 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 RHBDD2Q6NTF9 364 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 TAS2R4Q9NYW5 299 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 CKLFQ9UBR5 152 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
PTPN2-201ENST00000309660 TRBV5-5A0A0J9YX44 114 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 TO15178 435 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 RBBP9O75884 186 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 OR2J2O76002 312 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 ALDOBP05062 364 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 SLC26A5P58743 744 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
PTPN2-201ENST00000309660 DYRK1AQ13627 763 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 OR51A2Q8NGJ7 313 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 CMKLR1Q99788 373 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF768Q9H5H4 540 aaKnown RBP10.37□□□□□ -0.75
PTPN2-201ENST00000309660 C12orf10Q9HB07 376 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 HRH3Q9Y5N1 445 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 IGLV1-36A0A0B4J1U3 117 aa10.37□□□□□ -0.75
PTPN2-201ENST00000309660 IGKV1D-43A0A0B4J1Z2 117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms