RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SGCAQ16586 387 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF362Q5T0B9 420 aaPredicted RBP19.53■□□□□ 0.72
HOXD4-201ENST00000306324 DNM1P34Q6PK57 102 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 SH3GL3Q99963 347 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 RIBC2Q9H4K1 309 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 DCLRE1BQ9H816 532 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 SLC25A19Q9HC21 320 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 OBP2BQ9NPH6 170 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 CMC2Q9NRP2 79 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 USE1Q9NZ43 259 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 CACNA1DQ01668 2161 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 ARPC4-TTLL3A0A0A6YYG9 625 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 A6NNC1 897 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 DCTN6O00399 190 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 HLA-HP01893 362 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 HMGN1P05114 100 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 CD79AP11912 226 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF3P17036 446 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 NPR2P20594 1047 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 EPHA2P29317 976 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 CENPAP49450 140 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF83P51522 516 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 MRPS34P82930 218 aaKnown RBP19.52■□□□□ 0.72
HOXD4-201ENST00000306324 FBXW10Q5XX13 1052 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 SKA3Q8IX90 412 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 CCDC36Q8IYA8 594 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF295-AS1Q8N0V1 137 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 OR6V1Q8N148 313 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 LRRC18Q8N456 261 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 SLC29A1Q99808 456 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 NPAP1Q9NZP6 1156 aa19.52■□□□□ 0.72
HOXD4-201ENST00000306324 COA3Q9Y2R0 106 aaPredicted RBP19.52■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF503-AS2A6NEH8 195 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 PIGFQ07326 219 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 NPRL3Q12980 569 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 LRRC36Q1X8D7 754 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 NRN1LQ496H8 165 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 SEZ6L2Q6UXD5 910 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 NANOS1Q8WY41 292 aaKnown RBP19.51■□□□□ 0.71
HOXD4-201ENST00000306324 NABP1Q96AH0 204 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 OTULINQ96BN8 352 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 PIK3IP1Q96FE7 263 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 PLEKHA8Q96JA3 519 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 SIAEQ9HAT2 523 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 B9D1Q9UPM9 204 aa19.51■□□□□ 0.71
HOXD4-201ENST00000306324 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.5■□□□□ 0.71
HOXD4-201ENST00000306324 M0R1B8 84 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 SIAH2O43255 324 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 RRP9O43818 475 aaKnown RBP19.5■□□□□ 0.71
HOXD4-201ENST00000306324 PATE4P0C8F1 98 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 POLR2IP36954 125 aaKnown RBP19.5■□□□□ 0.71
HOXD4-201ENST00000306324 RAD23AP54725 363 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 BEX5Q5H9J7 111 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 C1QTNF12Q5T7M4 302 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 LPCAT4Q643R3 524 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 SLC16A14Q7RTX9 510 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 GLB1L2Q8IW92 636 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 OR9Q1Q8NGQ5 310 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 PLPPR2Q96GM1 343 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 SLC38A2Q96QD8 506 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 DDOQ99489 341 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 GABARAPL3Q9BY60 117 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 TVP23BQ9NYZ1 205 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 ZNF224Q9NZL3 707 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 FKBP7Q9Y680 259 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 LRBAP50851 2863 aa19.5■□□□□ 0.71
HOXD4-201ENST00000306324 IGLV1-36A0A0B4J1U3 117 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 FAM183AA6NL82 134 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 FAM171A2A8MVW0 826 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 DEFB108AA8MXU0 73 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 SURF4O15260 269 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 MSR1P21757 451 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 LAP3P28838 519 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 TLE4Q04727 773 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 SNAPC1Q16533 368 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 GSG1Q2KHT4 349 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 ZIK1Q3SY52 487 aaPredicted RBP19.49■□□□□ 0.71
HOXD4-201ENST00000306324 FOXL2NBQ6ZUU3 175 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 PROKR2Q8NFJ6 384 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 OR2T4Q8NH00 348 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 KCNN2Q9H2S1 579 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 ESRP2Q9H6T0 727 aaKnown RBP19.49■□□□□ 0.71
HOXD4-201ENST00000306324 POLE4Q9NR33 117 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 UNC79Q9P2D8 2635 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 TACC2O95359 2948 aa19.49■□□□□ 0.71
HOXD4-201ENST00000306324 ZAR1LA6NP61 321 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 UBL3O95164 117 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 GPANK1O95872 356 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 PAICSP22234 425 aaKnown RBP19.48■□□□□ 0.71
HOXD4-201ENST00000306324 PEX2P28328 305 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 ZBTB46Q86UZ6 589 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 MDP1Q86V88 176 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 FGFBP3Q8TAT2 258 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 C14orf79Q96F83 325 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 PRRG3Q9BZD7 231 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 RACGAP1Q9H0H5 632 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 RNF121Q9H920 327 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 MED20Q9H944 212 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 EMC7Q9NPA0 242 aa19.48■□□□□ 0.71
HOXD4-201ENST00000306324 B3GNT2Q9NY97 397 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms