RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CDAP32320 146 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 GUCA1AP43080 201 aaPredicted RBP22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 MNAT1P51948 309 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 TBC1D28Q2M2D7 210 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 SPATS1Q496A3 300 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 SLC25A47Q6Q0C1 308 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 FAM86B1Q8N7N1 296 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 OR1J2Q8NGS2 313 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 PYURFQ96I23 114 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 CDRT15Q96T59 188 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 PIMREGQ9BSJ6 248 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 LRMDAQ9H2I8 198 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 CDH20Q9HBT6 801 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 CCNB1IP1Q9NPC3 277 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 GRHPRQ9UBQ7 328 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 CD300AQ9UGN4 299 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 ARFGEF3Q5TH69 2177 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 LOC390937A0A1W2PQ73 354 aa22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 SH3PXD2BA1X283 911 aa22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 VLDLRP98155 873 aa22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 SGCAQ16586 387 aa22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 ARIH2OSQ8N7S6 290 aa22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 FAM46AQ96IP4 442 aaKnown RBP22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 MRPL37Q9BZE1 423 aaKnown RBP22.78■■□□□ 1.24
CDKN2A-201ENST00000304494 CR1P17927 2039 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 HIVEP2P31629 2446 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 IGKV1D-43A0A0B4J1Z2 117 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 SYNGR3O43761 229 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 SNAP29O95721 258 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 MMP7P09237 267 aaPredicted RBP22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 SMIM11AP58511 58 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 HSF2Q03933 536 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 CARTPTQ16568 116 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 NABP1Q96AH0 204 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 MCUR1Q96AQ8 359 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 DHRS1Q96LJ7 313 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 NSMCE2Q96MF7 247 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 V9GYQ6 96 aa22.77■■□□□ 1.24
CDKN2A-201ENST00000304494 M0R233 179 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 DYNC1I1O14576 645 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 ARPC2O15144 300 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 CD14P08571 375 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 ADRA2AP08913 450 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 USF1P22415 310 aaPredicted RBP22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 ERVK-25P63136 954 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 TMEM249Q2WGJ8 235 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 FAM27BQ5VT28 67 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 DEFB107AQ8IZN7 70 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 CLDN22Q8N7P3 220 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 ZNF540Q8NDQ6 660 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 CCT8L2Q96SF2 557 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 MS4A5Q9H3V2 200 aa22.76■■□□□ 1.23
CDKN2A-201ENST00000304494 XKRYO14609 159 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 AHCYL1O43865 530 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 DIRAS1O95057 198 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 NDUFB2O95178 105 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 SEMG1P04279 462 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 APLNRP35414 380 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 OMPP47874 163 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 LIMS1P48059 325 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 PABPC1L2AQ5JQF8 200 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 SYT3Q9BQG1 590 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 AURKCQ9UQB9 309 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 ADAM18Q9Y3Q7 739 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 CSPG4Q6UVK1 2322 aa22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 FN1P02751 2386 aaKnown RBP22.75■■□□□ 1.23
CDKN2A-201ENST00000304494 TRBV4-1A0A0J9YWV2 114 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 VWC2LB2RUY7 222 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 CCL2P13500 99 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 DAOP14920 347 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 MSX2P35548 267 aaPredicted RBP22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 RAD52P43351 418 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 NR4A2P43354 598 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 MSMPQ1L6U9 139 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 RGS7BPQ6MZT1 257 aaPredicted RBP22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 FOXL2NBQ6ZUU3 175 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 ZCCHC24Q8N2G6 241 aaKnown RBP22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 PAQR4Q8N4S7 273 aaPredicted RBP22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 OR52J3Q8NH60 311 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 ZNF570Q96NI8 536 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 BCL2L14Q9BZR8 327 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 REV1Q9UBZ9 1251 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 DUSP13Q9UII6 198 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 SIGLEC7Q9Y286 467 aa22.74■■□□□ 1.23
CDKN2A-201ENST00000304494 TLN2Q9Y4G6 2542 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 A0A1W2PPL8 197 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 PTP4A3O75365 173 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 GADD45GO95257 159 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 FAM107AO95990 144 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 CST2P09228 141 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 FAM157BP0CG42 384 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 ZNF26P17031 533 aaPredicted RBP22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 ZNF32P17041 273 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 SELENOVP59797 346 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 PCBD1P61457 104 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 IQCCQ4KMZ1 466 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 FAM122BQ7Z309 247 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 FITM2Q8N6M3 262 aa22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 RSRC1Q96IZ7 334 aaKnown RBP22.73■■□□□ 1.23
CDKN2A-201ENST00000304494 Q96M85 177 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms