RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TSTD3H0UI37 97 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 NXPH3O95157 252 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 BCKDHBP21953 392 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 TGFBR1P36897 503 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 BTG1P62324 171 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 TEKQ02763 1124 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 NAXDQ8IW45 347 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 MYEOVQ96EZ4 313 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 FITM1A5D6W6 292 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 TARM1B6A8C7 271 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 P2RX1P51575 399 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
PRKCB-201ENST00000303531 PHLDA2Q53GA4 152 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 FGF17O60258 216 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 NXPH2O95156 264 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 SOD1P00441 154 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 HBE1P02100 147 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 ARRB2P32121 409 aa12.78□□□□□ -0.36
PRKCB-201ENST00000303531 GABARAPH6UMI1 98 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 M0R082 166 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 SCGB2A2Q13296 93 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 ELAVL1Q15717 326 aaKnown RBP12.77□□□□□ -0.36
PRKCB-201ENST00000303531 WDR88Q6ZMY6 472 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 RBPMSQ93062 196 aaKnown RBP12.77□□□□□ -0.36
PRKCB-201ENST00000303531 CMC2Q9NRP2 79 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 TEX51A0A1B0GUA7 166 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 GLSO94925 669 aaPredicted RBP12.77□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF133P52736 654 aaPredicted RBP12.77□□□□□ -0.36
PRKCB-201ENST00000303531 KCNAB1Q14722 419 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 HMGN3Q15651 99 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 ESCO2Q56NI9 601 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 BCORP1Q8N888 145 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 HSD17B11Q8NBQ5 300 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 OR1J2Q8NGS2 313 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 LIPHQ8WWY8 451 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 BANF2Q9H503 90 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 GAREM1Q9H706 876 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 TAS2R4Q9NYW5 299 aa12.77□□□□□ -0.36
PRKCB-201ENST00000303531 ASAH1Q13510 395 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 TMUB2Q71RG4 321 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 EMC6Q9BV81 110 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 OR52A5Q9H2C5 316 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 SBK3P0C264 359 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 EN2P19622 333 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-201ENST00000303531 CD27P26842 260 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 OR52I2Q8NH67 350 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 CSF3RQ99062 836 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 CCSO14618 274 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 ZDHHC11BP0C7U3 371 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 CALCBP10092 127 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 SNCAP37840 140 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 PRTGQ2VWP7 1150 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 FCRL6Q6DN72 434 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
PRKCB-201ENST00000303531 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 C6orf106Q9H6K1 298 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-201ENST00000303531 AGAP14A8MT82 685 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 OXA1LQ15070 435 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 TMEM179BQ7Z7N9 219 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 FYTTD1Q96QD9 318 aaKnown RBP12.77□□□□□ -0.37
PRKCB-201ENST00000303531 FAM234AQ9H0X4 552 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 SLC39A9Q9NUM3 307 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 RPH3ALQ9UNE2 315 aa12.77□□□□□ -0.37
PRKCB-201ENST00000303531 AKR1C1Q04828 323 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 OR11L1Q8NGX0 322 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 ARSGQ96EG1 525 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 TERB2Q8NHR7 220 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 PATE1Q8WXA2 126 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
PRKCB-201ENST00000303531 RNF32Q9H0A6 362 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 CDCP1Q9H5V8 836 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
PRKCB-201ENST00000303531 PDGFAP04085 211 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 FOLR1P15328 257 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 SPI1P17947 270 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 ACHEP22303 614 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 DUSP8Q13202 625 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 FOXB2Q5VYV0 432 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 DDOQ99489 341 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 POM121BA6NF01 834 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 FCMRO60667 390 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 DGCR2P98153 550 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
PRKCB-201ENST00000303531 UHRF2Q96PU4 802 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 HSD17B6O14756 317 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
PRKCB-201ENST00000303531 ECI1P42126 302 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 SOHLH1Q5JUK2 328 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 OR10R2Q8NGX6 335 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 UBL7Q96S82 380 aaPredicted RBP12.76□□□□□ -0.37
PRKCB-201ENST00000303531 EXOSC3Q9NQT5 275 aaKnown RBP12.76□□□□□ -0.37
PRKCB-201ENST00000303531 PPP1R14DQ9NXH3 145 aa12.76□□□□□ -0.37
PRKCB-201ENST00000303531 LOC107986453A0A1B0GWG9 222 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms