RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 PLEKHB1Q9UF11 243 aaPredicted RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ADAM30Q9UKF2 790 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 IGHV3-15A0A0B4J1V0 119 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 PLGLB1Q02325 96 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 OR8H2Q8N162 312 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF454Q8N9F8 522 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 OR14A2Q96R54 314 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 GATBO75879 557 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 MPZL1O95297 269 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 PRKAR1AP10644 381 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 NR2C1P13056 603 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 CFL1P23528 166 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 RIDAP52758 137 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 RRADP55042 308 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 ODF4Q2M2E3 257 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 HSD17B12Q53GQ0 312 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 TPRA1Q86W33 373 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 FAM83FQ8NEG4 500 aaPredicted RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 OR6N1Q8NGY5 312 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 ABTB1Q969K4 478 aaPredicted RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 SLCO1C1Q9NYB5 712 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 VAMP5O95183 116 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 GLB1L2Q8IW92 636 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 GALNT16Q8N428 558 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 NOXO1Q8NFA2 376 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 CENPMQ9NSP4 180 aa12.96□□□□□ -0.33
SHCBP1-201ENST00000303383 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 PRR32B1ATL7 298 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 FAM25AB3EWG3 89 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 FAM25CB3EWG5 89 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 FAM25GB3EWG6 89 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 WDPCPO95876 746 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 GAAP10253 952 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 YIF1BQ5BJH7 314 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 ATP1A1-AS1Q5TC04 95 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 OR7E24Q6IFN5 339 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 VASH2Q86V25 355 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 ZNF679Q8IYX0 411 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 OR8B4Q96RC9 309 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 SLITRK2Q9H156 845 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 FANCFQ9NPI8 374 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 DEPPQ9NTK1 212 aa12.96□□□□□ -0.34
SHCBP1-201ENST00000303383 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 RFPL3SP0C7P2 107 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 RAB3BP20337 219 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 RFC3P40938 356 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 NBL1P41271 181 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 EIF1AXP47813 144 aaKnown RBP12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 PPP3R1P63098 170 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 CCDC190Q86UF4 302 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 LINC00346Q8IVM7 164 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 WDFY3Q8IZQ1 3526 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 HSPB2A8KAH6 182 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 ZNF814B7Z6K7 855 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 TRAF3IP2O43734 574 aaPredicted RBP12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 RAMP1O60894 148 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 ZFPL1O95159 310 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 OCM2P0CE71 109 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 OCMP0CE72 109 aaPredicted RBP12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 CARD18P57730 90 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 RASGEF1BQ0VAM2 473 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 HSPB2Q16082 182 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 AGAP7PQ5VUJ5 663 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 OR6X1Q8NH79 312 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 HSD17B8Q92506 261 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 AGAP4Q96P64 663 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 ABHD6Q9BV23 337 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 QPCTLQ9NXS2 382 aa12.95□□□□□ -0.34
SHCBP1-201ENST00000303383 A0A0J9YW62 118 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 SHISA3A0PJX4 238 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 CD1AP06126 327 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 CSRP1P21291 193 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 AZGP1P25311 298 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 NANOS3P60323 173 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 DCXRQ7Z4W1 244 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC26A10Q8NG04 563 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 OR2AJ1Q8NGZ0 328 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 AMELYQ99218 206 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 URB1O60287 2271 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 LRRC3CA6NJW4 275 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 H3BSH0 61 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 UPK1BO75841 260 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 SOX2P48431 317 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 DEFA1P59665 94 aa12.94□□□□□ -0.34
SHCBP1-201ENST00000303383 DEFA3P59666 94 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms