RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SSX6Q7RTT6 188 aa21.78■■□□□ 1.08
GTF2A1-201ENST00000298173 RFLNBQ8N5W9 214 aa21.78■■□□□ 1.08
GTF2A1-201ENST00000298173 MNTQ99583 582 aa21.78■■□□□ 1.08
GTF2A1-201ENST00000298173 ALG8Q9BVK2 526 aa21.78■■□□□ 1.08
GTF2A1-201ENST00000298173 CLEC4AQ9UMR7 237 aa21.78■■□□□ 1.08
GTF2A1-201ENST00000298173 FREM1Q5H8C1 2179 aa21.78■■□□□ 1.08
GTF2A1-201ENST00000298173 ZNF593O00488 134 aaPredicted RBP21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 MRPL33O75394 65 aaKnown RBP21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 UPK3AO75631 287 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 SCG5P05408 212 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 TIGD6Q17RP2 521 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 TEX30Q5JUR7 227 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 ZNF322Q6U7Q0 402 aaPredicted RBP21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 MCEMP1Q8IX19 187 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 KLHL36Q8N4N3 616 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 TRIB1Q96RU8 372 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 MGLLQ99685 303 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 RBM38Q9H0Z9 239 aaKnown RBP21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 CALHM2Q9HA72 323 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 GLRX2Q9NS18 164 aa21.77■■□□□ 1.08
GTF2A1-201ENST00000298173 MAP1BP46821 2468 aaKnown RBP21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 ALOX5APP20292 161 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 EDNRAP25101 427 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 PSMB9P28065 219 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 KLRB1Q12918 225 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 KCNMB1Q16558 191 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 MEP1BQ16820 701 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 ACSF3Q4G176 576 aaPredicted RBP21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 RIPPLY2Q5TAB7 128 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 FOXB2Q5VYV0 432 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 FOXL2NBQ6ZUU3 175 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 DPY19L4Q7Z388 723 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 OR6N2Q8NGY6 317 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 WNT2BQ93097 391 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 NDUFA13Q9P0J0 144 aa21.76■■□□□ 1.07
GTF2A1-201ENST00000298173 SMIM31A0A1B0GVY4 71 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 H3BSA7 217 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 DHHO43323 396 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ENTPD1P49961 510 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ZNF684Q5T5D7 378 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 OTPQ5XKR4 325 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 OTOSQ8NHW6 89 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 GATAD2BQ8WXI9 593 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 C11orf40Q8WZ69 217 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 GMPPAQ96IJ6 420 aaPredicted RBP21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 LINC00470Q9BZP3 86 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ISG20L2Q9H9L3 353 aaKnown RBP21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 KLHDC2Q9Y2U9 406 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 DOCK7Q96N67 2140 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 CD8B2A6NJW9 211 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 SFTPCP11686 197 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 RPS27P42677 84 aaKnown RBP21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ADAM8P78325 824 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ACSM1Q08AH1 577 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 GUSBP1Q15486 140 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 CDONQ4KMG0 1287 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 NSUN5P2Q63ZY6 315 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 LINGO2Q7L985 606 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 NUFIP2Q7Z417 695 aaKnown RBP21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 SPRYD4Q8WW59 207 aaPredicted RBP21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ZNF837Q96EG3 531 aaPredicted RBP21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ULBP2Q9BZM5 246 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ISYNA1Q9NPH2 558 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 CEPT1Q9Y6K0 416 aa21.75■■□□□ 1.07
GTF2A1-201ENST00000298173 ZNF670-ZNF695F2Z2N8 137 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 SS18L1O75177 396 aaPredicted RBP21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 AGTR1P30556 359 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 LIPAP38571 399 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 SF3B4Q15427 424 aaKnown RBP eCLIP21.74■■□□□ 1.072e-9■■■■■ 45.3
GTF2A1-201ENST00000298173 ARMCX4Q5H9R4 360 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 TSPO2Q5TGU0 170 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 ZNF585AQ6P3V2 769 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 C19orf48Q6RUI8 117 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 TMPRSS11AQ6ZMR5 421 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 P4HA3Q7Z4N8 544 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 EGFL6Q8IUX8 553 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 OPALINQ96PE5 141 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 SLCO5A1Q9H2Y9 848 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 ASF1BQ9NVP2 202 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 TMEM14AQ9Y6G1 99 aa21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 NCOA6Q14686 2063 aaPredicted RBP21.74■■□□□ 1.07
GTF2A1-201ENST00000298173 OR6C65A6NJZ3 312 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 PRR32B1ATL7 298 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 LALBAP00709 142 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 GABRA1P14867 456 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 ZNF823P16415 610 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 CDAP32320 146 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 MLLT11Q13015 90 aaPredicted RBP21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 PRR30Q53SZ7 412 aaPredicted RBP21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 SYS1Q8N2H4 156 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 GPR137CQ8N3F9 429 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 FAM57AQ8TBR7 257 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 CPT1CQ8TCG5 803 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 YIPF6Q96EC8 236 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 FAM192AQ9GZU8 254 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 CRLF2Q9HC73 371 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 POLE4Q9NR33 117 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 KCNG2Q9UJ96 466 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 ARHGAP21Q5T5U3 1957 aa21.73■■□□□ 1.07
GTF2A1-201ENST00000298173 A0A1W2PPL8 197 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms