RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 MIB2Q96AX9 1013 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 ABHD6Q9BV23 337 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 CACNG6Q9BXT2 260 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 METTL7AQ9H8H3 244 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 PRMT8Q9NR22 394 aaPredicted RBP21.51■■□□□ 1.03
TRIM54-201ENST00000296098 GTF2A1LQ9UNN4 478 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 C7orf66A4D0T2 115 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 C19orf67A6NJJ6 358 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 NPIPB13A6NJU9 1138 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 NPIPB4C9JG80 1138 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 OR2J2O76002 312 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 MT-ND4P03905 459 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 CYC1P08574 325 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 HOXD12P35452 270 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 RIDAP52758 137 aaKnown RBP21.51■■□□□ 1.03
TRIM54-201ENST00000296098 ART1P52961 327 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 TMEM69Q5SWH9 247 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 FAM205BPQ63HN1 556 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 OR10G3Q8NGC4 313 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 HAVCR1Q96D42 359 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 WIF1Q9Y5W5 379 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 MYO15AQ9UKN7 3530 aa21.51■■□□□ 1.03
TRIM54-201ENST00000296098 ARPC4-TTLL3A0A0A6YYG9 625 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SHISA8B8ZZ34 492 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 GABARAPH6UMI1 98 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SULT1B1O43704 296 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 POU3F1Q03052 451 aaPredicted RBP21.5■■□□□ 1.03
TRIM54-201ENST00000296098 OR7E24Q6IFN5 339 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 MRPL14Q6P1L8 145 aaKnown RBP21.5■■□□□ 1.03
TRIM54-201ENST00000296098 OR52N5Q8NH56 324 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SCMH1Q96GD3 660 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 MRGPRX4Q96LA9 322 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 C5orf34Q96MH7 638 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 GUCD1Q96NT3 240 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SDHAF3Q9NRP4 125 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 ALKBH4Q9NXW9 302 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 KLHL9Q9P2J3 617 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 IGLV3-32A0A0A0MS00 114 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 H3BML4 177 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 WNT11O96014 354 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 FGF5P12034 268 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 PTGDSP41222 190 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 MAP2K6P52564 334 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SCAND1P57086 179 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 HSF1Q00613 529 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 MFGE8Q08431 387 aaPredicted RBP21.5■■□□□ 1.03
TRIM54-201ENST00000296098 MAB21L1Q13394 359 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SNTB2Q13425 540 aaKnown RBP21.5■■□□□ 1.03
TRIM54-201ENST00000296098 LIX1LQ8IVB5 337 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 OR2I1PQ8NGU4 316 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 GCDHQ92947 438 aaPredicted RBP21.5■■□□□ 1.03
TRIM54-201ENST00000296098 KCNK17Q96T54 332 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 POTEKPQ9BYX7 375 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 SLC22A13Q9Y226 551 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 LRP12Q9Y561 859 aa21.5■■□□□ 1.03
TRIM54-201ENST00000296098 LIPT2A6NK58 231 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 KRT33AO76009 404 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 MPZL1O95297 269 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 PNPP00491 289 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 PDGFBP01127 241 aaPredicted RBP21.49■■□□□ 1.03
TRIM54-201ENST00000296098 C1QBP02746 253 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 FBXO45P0C2W1 286 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 ERP29P30040 261 aaKnown RBP21.49■■□□□ 1.03
TRIM54-201ENST00000296098 PTH2RP49190 550 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 CCR6P51684 374 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 FMODQ06828 376 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 NDUFA5Q16718 116 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 PLPPR5Q32ZL2 321 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 SLC25A53Q5H9E4 307 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 ASCC1Q8N9N2 400 aaKnown RBP21.49■■□□□ 1.03
TRIM54-201ENST00000296098 SLC26A10Q8NG04 563 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 OR52I2Q8NH67 350 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 NIPAL2Q9H841 368 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 PLSCR3Q9NRY6 295 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 STEAP1Q9UHE8 339 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 BOLA1Q9Y3E2 137 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 VCANP13611 3396 aa21.49■■□□□ 1.03
TRIM54-201ENST00000296098 CDK2P24941 298 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 PTGS2P35354 604 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 MRPS10P82664 201 aaKnown RBP21.48■■□□□ 1.03
TRIM54-201ENST00000296098 BPHLQ86WA6 291 aaPredicted RBP21.48■■□□□ 1.03
TRIM54-201ENST00000296098 DEFB126Q9BYW3 111 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 MED28Q9H204 178 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 RCE1Q9Y256 329 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 ALPK2Q86TB3 2170 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 ECDO95905 644 aaPredicted RBP21.48■■□□□ 1.03
TRIM54-201ENST00000296098 ZNF823P16415 610 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 MNDAP41218 407 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 AP3S2P59780 193 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 IL11RAQ14626 422 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 CATSPERDQ86XM0 798 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 FCAMRQ8WWV6 532 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 TMEM246Q9BRR3 403 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 GHITMQ9H3K2 345 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 WDR54Q9H977 334 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 AKIRIN1Q9H9L7 192 aaPredicted RBP21.48■■□□□ 1.03
TRIM54-201ENST00000296098 MED29Q9NX70 200 aa21.48■■□□□ 1.03
TRIM54-201ENST00000296098 D6RAR5 112 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 H0YC42 278 aa21.47■■□□□ 1.03
TRIM54-201ENST00000296098 CFPP27918 469 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms