RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 DDOQ99489 341 aa23.42■■□□□ 1.34
SSU72-201ENST00000291386 SH3GL3Q99963 347 aa23.42■■□□□ 1.34
SSU72-201ENST00000291386 FBXL3Q9UKT7 428 aa23.42■■□□□ 1.34
SSU72-201ENST00000291386 SHISA9B4DS77 424 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 KHDRBS3O75525 346 aaKnown RBP23.41■■□□□ 1.34
SSU72-201ENST00000291386 RENP00797 406 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 CD79AP11912 226 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 CRABP1P29762 137 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 CDAP32320 146 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 ETFDHQ16134 617 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 ZNF362Q5T0B9 420 aaPredicted RBP23.41■■□□□ 1.34
SSU72-201ENST00000291386 LEG1Q6P5S2 330 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 SLC16A14Q7RTX9 510 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 ZDHHC13Q8IUH4 622 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 LILRB1Q8NHL6 650 aaPredicted RBP23.41■■□□□ 1.34
SSU72-201ENST00000291386 TEX47Q8TBZ9 253 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 NUAK2Q9H093 628 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 NOX3Q9HBY0 568 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 NOTCH2Q04721 2471 aa23.41■■□□□ 1.34
SSU72-201ENST00000291386 H3BN98 237 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 SLC16A7O60669 478 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 ZNF23P17027 643 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 GUCA1AP43080 201 aaPredicted RBP23.4■■□□□ 1.34
SSU72-201ENST00000291386 DAPP51397 102 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 RAB1AP62820 205 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.4■■□□□ 1.34
SSU72-201ENST00000291386 SLC36A2Q495M3 483 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 DNM1P34Q6PK57 102 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 PARP8Q8N3A8 854 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 NPEPL1Q8NDH3 523 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 OR52E2Q8NGJ4 325 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 FGFBP3Q8TAT2 258 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 HTRA1Q92743 480 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 WACQ9BTA9 647 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 SEMA6AQ9H2E6 1030 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 S100A14Q9HCY8 104 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 EDARQ9UNE0 448 aa23.4■■□□□ 1.34
SSU72-201ENST00000291386 TACC2O95359 2948 aa23.39■■□□□ 1.34
SSU72-201ENST00000291386 SPG11Q96JI7 2443 aa23.39■■□□□ 1.34
SSU72-201ENST00000291386 MMP7P09237 267 aaPredicted RBP23.39■■□□□ 1.33
SSU72-201ENST00000291386 CECR9P0C854 216 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 ZNF14P17017 642 aaPredicted RBP23.39■■□□□ 1.33
SSU72-201ENST00000291386 LAP3P28838 519 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 PIGFQ07326 219 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 SGCAQ16586 387 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 ZNF672Q499Z4 452 aaPredicted RBP23.39■■□□□ 1.33
SSU72-201ENST00000291386 SLC35F1Q5T1Q4 408 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 ZBTB46Q86UZ6 589 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 IL17RDQ8NFM7 739 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 KBTBD8Q8NFY9 601 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 PKP2Q99959 881 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 RACGAP1Q9H0H5 632 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 KCNN2Q9H2S1 579 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 SEC61A2Q9H9S3 476 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 POLE4Q9NR33 117 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 PAPOLBQ9NRJ5 636 aaKnown RBP23.39■■□□□ 1.33
SSU72-201ENST00000291386 KIF17Q9P2E2 1029 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 KLHL21Q9UJP4 597 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 B9D1Q9UPM9 204 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 FKBP7Q9Y680 259 aa23.39■■□□□ 1.33
SSU72-201ENST00000291386 ROS1P08922 2347 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 OR6C68A6NDL8 312 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 HS3ST1O14792 307 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 RAB36O95755 333 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 CST2P09228 141 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 MSR1P21757 451 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 GRK5P34947 590 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 GIPRP48546 466 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 NAAAQ02083 359 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 PGGHGQ32M88 737 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 PAMR1Q6UXH9 720 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 OR6V1Q8N148 313 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 DEPDC4Q8N2C3 294 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 PIAS4Q8N2W9 510 aaPredicted RBP23.38■■□□□ 1.33
SSU72-201ENST00000291386 SDR9C7Q8NEX9 313 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 AKAP1Q92667 903 aaKnown RBP eCLIP23.38■■□□□ 1.33
SSU72-201ENST00000291386 NRGNQ92686 78 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 OSBPL10Q9BXB5 764 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 LIME1Q9H400 295 aa23.38■■□□□ 1.33
SSU72-201ENST00000291386 COA3Q9Y2R0 106 aaPredicted RBP23.38■■□□□ 1.33
SSU72-201ENST00000291386 PDZD2O15018 2839 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 IGLV1-36A0A0B4J1U3 117 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 A0A1W2PPL8 197 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 DCTN6O00399 190 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 CELA3BP08861 270 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 PATE4P0C8F1 98 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 PTDSS1P48651 473 aaKnown RBP23.37■■□□□ 1.33
SSU72-201ENST00000291386 IDH3GP51553 393 aaPredicted RBP23.37■■□□□ 1.33
SSU72-201ENST00000291386 CDK5Q00535 292 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 SPOCK1Q08629 439 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 KDM4DQ6B0I6 523 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 SLC27A4Q6P1M0 643 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 TMEM53Q6P2H8 277 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 C20orf204Q6ZNR8 217 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 GLB1L2Q8IW92 636 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 LRRC18Q8N456 261 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 ZNF611Q8N823 705 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 NINJ1Q92982 152 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 CMC2Q9NRP2 79 aa23.37■■□□□ 1.33
SSU72-201ENST00000291386 ST6GALNAC2Q9UJ37 374 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms