RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TSPAN11A1L157 253 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 TRABD2BA6NFA1 517 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 SYT5O00445 386 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 TNFSF11O14788 317 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 ERCC1P07992 297 aaPredicted RBP4.36□□□□□ -1.71
UBR1-201ENST00000290650 GUSBP08236 651 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 KIR2DL3P43628 341 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 HTR5AP47898 357 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 NPY4RP50391 375 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 RRAS2P62070 204 aaPredicted RBP4.36□□□□□ -1.71
UBR1-201ENST00000290650 ZIC1Q15915 447 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 OR5D14Q8NGL3 314 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 OR51E1Q8TCB6 317 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 TAAR8Q969N4 342 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 DDOQ99489 341 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 ATF6BQ99941 703 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 NAA11Q9BSU3 229 aaPredicted RBP4.36□□□□□ -1.71
UBR1-201ENST00000290650 CDCA4Q9BXL8 241 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 DUSP22Q9NRW4 184 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 RBFOX1Q9NWB1 397 aaKnown RBP4.36□□□□□ -1.71
UBR1-201ENST00000290650 OR14J1Q9UGF5 321 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 ACAD8Q9UKU7 415 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 HHLA2Q9UM44 414 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 THADAQ6YHU6 1953 aa4.36□□□□□ -1.71
UBR1-201ENST00000290650 A6NCN8 305 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 TMEM235A6NFC5 223 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 H0YIG0 161 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SDCBPO00560 298 aaPredicted RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 MRPS14O60783 128 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 IGHG1P01857 330 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 DPP4P27487 766 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ERP29P30040 261 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 PLP2Q04941 152 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 BRICD5Q6PL45 260 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 RTL10Q7L3V2 364 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SUMF1Q8NBK3 374 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SLC46A1Q96NT5 459 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR2A5Q96R48 311 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ARHGAP9Q9BRR9 750 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 UQCC2Q9BRT2 126 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 FAM234AQ9H0X4 552 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 FKRPQ9H9S5 495 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CMC2Q9NRP2 79 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ASH2LQ9UBL3 628 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 NLRC5Q86WI3 1866 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 A0A0B4J2A0 478 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SPTY2D1-AS1A0A0U1RR47 76 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR6C68A6NDL8 312 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CENPBD1B2RD01 187 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 GLCEO94923 617 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 IL9P15248 144 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 TUBG1P23258 451 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 DLSTP36957 453 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HTR3AP46098 478 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 PRICKLE4Q2TBC4 344 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 FAM76BQ5HYJ3 339 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 MAMSTRQ6ZN01 415 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 LRRC56Q8IYG6 542 aaPredicted RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR5AS1Q8N127 324 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 DEFB123Q8N688 67 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ESX1Q8N693 406 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR4C15Q8NGM1 316 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SLC7A6Q92536 515 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CMBLQ96DG6 245 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 TRMT61AQ96FX7 289 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 GNRHR2Q96P88 292 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 URM1Q9BTM9 101 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 CRISPLD2Q9H0B8 497 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 QPCTLQ9NXS2 382 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SHPKQ9UHJ6 478 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HS3ST3A1Q9Y663 406 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 TRAV36DV7A0A075B6V5 113 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SMCO3A2RU48 225 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 RAD51DO75771 328 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HTR2CP28335 458 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 NUDT1P36639 197 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 RBM34P42696 430 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 CAPZBP47756 277 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 C3orf33Q6P1S2 294 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR14A16Q8NHC5 309 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 FAM3DQ96BQ1 224 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 NUDT9Q9BW91 350 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 PAPOLGQ9BWT3 736 aaKnown RBP4.35□□□□□ -1.71
UBR1-201ENST00000290650 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 PCDHGA5Q9Y5G8 931 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 ROS1P08922 2347 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 PCNX1Q96RV3 2341 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 NBASA2RRP1 2371 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 B4DXG7 233 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 GZMMP51124 257 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 FAM198BQ6UWH4 519 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 BAIAP2L2Q6UXY1 529 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HEATR5AQ86XA9 2040 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 CCDC54Q8NEL0 328 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 OR4S1Q8NGB4 309 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 MFSD8Q8NHS3 518 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 EDAQ92838 391 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 STACQ99469 402 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 HRH4Q9H3N8 390 aa4.35□□□□□ -1.71
UBR1-201ENST00000290650 SPTA1P02549 2419 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms