RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 IL2RAP01589 272 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 PDGFAP04085 211 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CPN1P15169 458 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 MYF6P23409 242 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC6A6P31641 620 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 APLNRP35414 380 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 MAGEA5P43359 124 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 PIGFQ07326 219 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC10A1Q14973 349 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 PDK3Q15120 406 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SLX4IPQ5VYV7 408 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 DPY19L2P2Q6ZN68 376 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 UEVLDQ8IX04 471 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 OR5M9Q8NGP3 310 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 KTI12Q96EK9 354 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 PRDM14Q9GZV8 571 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 HMG20AQ9NP66 347 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 KLHL21Q9UJP4 597 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 TNCP24821 2201 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 ANKRD34BA5PLL1 514 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 OR14I1A6ND48 311 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM90A27PA6NNH2 459 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 RGS10O43665 173 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 EFNA2O43921 213 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 BPNT1O95861 308 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 TXNDC12O95881 172 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 PAHP00439 452 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 HRGP04196 525 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 DBHP09172 617 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CD97P48960 835 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 ARPC4P59998 168 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 TMED4Q7Z7H5 227 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 YRDCQ86U90 279 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 GGNQ86UU5 652 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 KIF18BQ86Y91 864 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 LRRC75AQ8NAA5 344 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 LRRC20Q8TCA0 184 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 EXTL1Q92935 676 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 HAO2Q9NYQ3 351 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 RASD1Q9Y272 281 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 B3GALT5Q9Y2C3 310 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 IGF2RP11717 2491 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 NCKAP5O14513 1909 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SPTBN4Q9H254 2564 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 PYCR1P32322 319 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 LHX2P50458 406 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SMSP52788 366 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 NFATC3Q12968 1075 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CDK10Q15131 360 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CTU2Q2VPK5 515 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 KRTCAP3Q53RY4 240 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF691Q5VV52 312 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SNX29P2Q8IUI4 249 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 TRUB1Q8WWH5 349 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 TMED9Q9BVK6 235 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 ENY2Q9NPA8 101 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CHST11Q9NPF2 352 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 LOC100130705A0A1B0GUX0 176 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 AQP7P3A6NL99 342 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CENPBD1B2RD01 187 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CDC42EP2O14613 210 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 AHCYL1O43865 530 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 GATBO75879 557 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 NDUFB2O95178 105 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 VAMP5O95183 116 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 FUT1P19526 365 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 RPS5P46782 204 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 CLDN18P56856 261 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 ZMYND11Q15326 602 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 MARVELD2Q8N4S9 558 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 DTX3Q8N9I9 347 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 GALNT11Q8NCW6 608 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 BHLHE23Q8NDY6 225 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 KBTBD8Q8NFY9 601 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 OR2V1Q8NHB1 315 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 GPA33Q99795 319 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 SF3B5Q9BWJ5 86 aaKnown RBP7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 EMC9Q9Y3B6 208 aa7.55□□□□□ -1.2
PTPDC1-201ENST00000288976 MED12Q93074 2177 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 SNAP29O95721 258 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 TNFSF4P23510 183 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 MAD2L1BPQ15013 274 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 VASNQ6EMK4 673 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ARHGAP11AQ6P4F7 1023 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 KCTD18Q6PI47 426 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 HAGHLQ6PII5 290 aaPredicted RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 LSM14AQ8ND56 463 aaKnown RBP7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ULBP2Q9BZM5 246 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 RNF122Q9H9V4 155 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 C5orf51A6NDU8 294 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 BHLHE40O14503 412 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 HTR1AP08908 422 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF44P15621 663 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 CELP19835 753 aa7.54□□□□□ -1.2
PTPDC1-201ENST00000288976 THBS2P35442 1172 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms