RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GLO1Q04760 184 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 GUSBP1Q15486 140 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 SEM1Q6ZVN7 128 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 NUFIP2Q7Z417 695 aaKnown RBP16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 DOLPP1Q86YN1 238 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 DGCR14Q96DF8 476 aaKnown RBP16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 OR5M11Q96RB7 305 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 EXOSC1Q9Y3B2 195 aaKnown RBP16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 ATRXP46100 2492 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 OR6C65A6NJZ3 312 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 UPK3AO75631 287 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 MYL12AP19105 171 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 C10orf128Q5T292 105 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 FAM214BQ7L5A3 538 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 ZNF367Q7RTV3 350 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 GCNT2Q8N0V5 402 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 GPR137CQ8N3F9 429 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 POMGNT2Q8NAT1 580 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 NSMAFQ92636 917 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 COG8Q96MW5 612 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 MND1Q9BWT6 205 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 ULBP2Q9BZM5 246 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 SLCO5A1Q9H2Y9 848 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 SPTA1P02549 2419 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 TMEM129A0AVI4 362 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 RIPPLY2Q5TAB7 128 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 LYPD4Q6UWN0 246 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 CLVS1Q8IUQ0 354 aaPredicted RBP16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 GLB1L2Q8IW92 636 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 ST6GALNAC3Q8NDV1 305 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 APH1AQ96BI3 265 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 CNN2Q99439 309 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 LINC00470Q9BZP3 86 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 B3GAT2Q9NPZ5 323 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 NBEAQ8NFP9 2946 aa16.71■□□□□ 0.27
PDLIM3-202ENST00000284770 ATXN7O15265 892 aaPredicted RBP16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 GPANK1O95872 356 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 MRPL3P09001 348 aaKnown RBP16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 EDNRAP25101 427 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 TIMP3P35625 211 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 TIGD6Q17RP2 521 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 TSPO2Q5TGU0 170 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 GPR107Q5VW38 600 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 LHFPL3Q86UP9 236 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 TIGD4Q8IY51 512 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF100Q8IYN0 542 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 FOXN4Q96NZ1 517 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 MARCH7Q9H992 704 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 ERVK13-1Q9NX77 482 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 EMC9Q9Y3B6 208 aa16.7■□□□□ 0.26
PDLIM3-202ENST00000284770 TVP23AA6NH52 213 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 C12orf71A8MTZ7 269 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 MYL12BO14950 172 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 DHHO43323 396 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 TOXO94900 526 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 HLA-DQA2P01906 255 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 LAP3P28838 519 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 HSF2Q03933 536 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 MED22Q15528 200 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 C3P1Q6ZMU1 363 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 RPRMLQ8N4K4 120 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 ACBD7Q8N6N7 88 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 ZNF485Q8NCK3 441 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 YIPF6Q96EC8 236 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 CRLF2Q9HC73 371 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 MRPL22Q9NWU5 206 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 SELENOFO60613 162 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 TFP02787 698 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 GAAP10253 952 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 TGFBR2P37173 567 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 LIPAP38571 399 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 NAA10P41227 235 aaPredicted RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 KIR2DL2P43627 348 aaPredicted RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 PER3P56645 1201 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 SPHARQ15513 63 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 EIF2S3LQ2VIR3 472 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 LINGO2Q7L985 606 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 SLC26A10Q8NG04 563 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 ZFP3Q96NJ6 502 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 ALKBH3Q96Q83 286 aaPredicted RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 MGLLQ99685 303 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 TTYH2Q9BSA4 534 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 FUNDC2Q9BWH2 189 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 RBM24Q9BX46 236 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 NAA50Q9GZZ1 169 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 C12orf49Q9H741 205 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 WDR76Q9H967 626 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 INPP5EQ9NRR6 644 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 SLC7A10Q9NS82 523 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 CHCHD3Q9NX63 227 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 TINAGQ9UJW2 476 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 UGT2A1Q9Y4X1 527 aa16.69■□□□□ 0.26
PDLIM3-202ENST00000284770 CCDC160A6NGH7 325 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 KRT33AO76009 404 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 IL2RAP01589 272 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 IGHV3-9P01782 118 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 HRGP04196 525 aa16.68■□□□□ 0.26
PDLIM3-202ENST00000284770 CRHP06850 196 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms