RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ANKRD61A6NGH8 418 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TMEM212A6NML5 194 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF814B7Z6K7 855 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SULT2B1O00204 365 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 PDCD5O14737 125 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 PMS2P2O95744 297 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 EIF4EP06730 217 aaKnown RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ATF1P18846 271 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 KIR3DL2P43630 455 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 CCR9P51686 369 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 RASGEF1BQ0VAM2 473 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ASAH1Q13510 395 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 IL18Q14116 193 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TAB1Q15750 504 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 DHRS13Q6UX07 377 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 KRT77Q7Z794 578 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 Q8N402 240 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF676Q8N7Q3 588 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SAMD12Q8N8I0 201 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SUMF1Q8NBK3 374 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 C4orf45Q96LM5 186 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 JSRP1Q96MG2 331 aaPredicted RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 KCNJ15Q99712 375 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 GPR87Q9BY21 358 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 COMMD4Q9H0A8 199 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SACM1LQ9NTJ5 587 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 EXTL2Q9UBQ6 330 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 WDR87Q6ZQQ6 2873 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 OR2M5A3KFT3 312 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 TRABD2BA6NFA1 517 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 AQP7P3A6NL99 342 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 TERTO14746 1132 aaKnown RBP8.56□□□□□ -1.04
TRIM55-201ENST00000276573 PLA2G10O15496 165 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 TRAF3IP2O43734 574 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-201ENST00000276573 SSX4O60224 188 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 AQP8O94778 261 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 HLA-DQB1P01920 261 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 P04436 131 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 MAPK3P27361 379 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-201ENST00000276573 DLSTP36957 453 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 RFX2P48378 723 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 CAMK2DQ13557 499 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 WDR38Q5JTN6 314 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 ACER2Q5QJU3 275 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 THEM4Q5T1C6 240 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 NRARPQ7Z6K4 114 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 GLB1L2Q8IW92 636 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 RDH10Q8IZV5 341 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-201ENST00000276573 OR4M1Q8NGD0 313 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 OR5H6Q8NGV6 325 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 PSMF1Q92530 271 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 SLC25A44Q96H78 314 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-201ENST00000276573 GFI1Q99684 422 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 SMAD5Q99717 465 aaKnown RBP8.56□□□□□ -1.04
TRIM55-201ENST00000276573 ANKRD10Q9NXR5 420 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 SPEGQ15772 3267 aa8.56□□□□□ -1.04
TRIM55-201ENST00000276573 TRBV5-7A0A0A0MS05 114 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 C21orf140B9A014 251 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 GPR171O14626 319 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 RAMP1O60894 148 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF254O75437 659 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 PNPP00491 289 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 RAF1P04049 648 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 HRGP04196 525 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 PGA4P0DJD7 388 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 PGA3P0DJD8 388 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SNRPBP14678 240 aaKnown RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 RANBP1P43487 201 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SOX2P48431 317 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 CD97P48960 835 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 DNASE1L1P49184 302 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 RIDAP52758 137 aaKnown RBP8.55□□□□□ -1.04
TRIM55-201ENST00000276573 H3F3AP84243 136 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 HES3Q5TGS1 186 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 STAC2Q6ZMT1 411 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SPATC1Q76KD6 591 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 GPAT4Q86UL3 456 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF227Q86WZ6 799 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 OR10AC1Q8NH08 325 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 OR52N5Q8NH56 324 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 OR6X1Q8NH79 312 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 GPR148Q8TDV2 347 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 C11orf40Q8WZ69 217 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 NEDD4LQ96PU5 975 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SLC25A18Q9H1K4 315 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 BRD7Q9NPI1 651 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 TEKT2Q9UIF3 430 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 DKKL1Q9UK85 242 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 SPATA2Q9UM82 520 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 PCSK5Q92824 1860 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 ARPC4-TTLL3A0A0A6YYG9 625 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 A0A0B4J203 849 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 A0A0G2JMP0 313 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 A0A0X1KG70 313 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 LOC101059948A0A1B0GTJ6 334 aa8.55□□□□□ -1.04
TRIM55-201ENST00000276573 IFITM5A6NNB3 132 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms