RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SAMD4AQ9UPU9 718 aaKnown RBP12.42□□□□□ -0.42
HMGN3-201ENST00000275036 ADAM18Q9Y3Q7 739 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 CMAHPQ9Y471 501 aa12.42□□□□□ -0.42
HMGN3-201ENST00000275036 TLX2O43763 284 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-201ENST00000275036 MGRN1O60291 552 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 DCTN3O75935 186 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 IGHV4-31P0DP07 118 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-201ENST00000275036 GLRXP35754 106 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 OMPP47874 163 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 LIMS1P48059 325 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 ERVK-25P63136 954 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 ANKDD1AQ495B1 522 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 SLC36A2Q495M3 483 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 ZBED5Q49AG3 693 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
HMGN3-201ENST00000275036 TMEM53Q6P2H8 277 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 DEFB107AQ8IZN7 70 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 FITM2Q8N6M3 262 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 SLC30A7Q8NEW0 376 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 CCT8L2Q96SF2 557 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 RNF121Q9H920 327 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 SIAEQ9HAT2 523 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 MAGEL2Q9UJ55 1249 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 FBXL3Q9UKT7 428 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 FZR1Q9UM11 496 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 FKBP7Q9Y680 259 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 ATRQ13535 2644 aa12.41□□□□□ -0.42
HMGN3-201ENST00000275036 H7C1C5 153 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 ARPC2O15144 300 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 ENTPD5O75356 428 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 PTP4A3O75365 173 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 ADRA2AP08913 450 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 CSF3P09919 207 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF32P17041 273 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 PDLIM4P50479 330 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 FXYD6P3P58550 94 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 LCN6P62502 163 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 GALK2Q01415 458 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 SGCAQ16586 387 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 MESTQ5EB52 335 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 FGD3Q5JSP0 725 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 THEM4Q5T1C6 240 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.42
HMGN3-201ENST00000275036 THSD4Q6ZMP0 1018 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 FOXL2NBQ6ZUU3 175 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 DPPA2Q7Z7J5 298 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
HMGN3-201ENST00000275036 OR52J3Q8NH60 311 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 PYURFQ96I23 114 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 Q96M85 177 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 GPA33Q99795 319 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 SYT3Q9BQG1 590 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 SIGLEC7Q9Y286 467 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 FAM32AQ9Y421 112 aaKnown RBP12.4□□□□□ -0.42
HMGN3-201ENST00000275036 SPEF1Q9Y4P9 236 aa12.4□□□□□ -0.42
HMGN3-201ENST00000275036 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 A6NIZ1 184 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 A8MV72 311 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-201ENST00000275036 VSTM5A8MXK1 200 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 GMNNO75496 209 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 SCG5P05408 212 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 CD14P08571 375 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 USF1P22415 310 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-201ENST00000275036 APEX1P27695 318 aaKnown RBP12.39□□□□□ -0.43
HMGN3-201ENST00000275036 RPL4P36578 427 aaKnown RBP12.39□□□□□ -0.43
HMGN3-201ENST00000275036 ALDH3B1P43353 468 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 NR4A2P43354 598 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 EVX1P49640 407 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 RAP1BP61224 184 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 ERVS71-1P61550 626 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 RAP1AP62834 184 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 KRT72Q14CN4 511 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 MAD2L1BPQ15013 274 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-201ENST00000275036 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 FAM27BQ5VT28 67 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 FAM205BPQ63HN1 556 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 RRM2BQ7LG56 351 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 HIPK1Q86Z02 1210 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 NSMCE2Q96MF7 247 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 RBP7Q96R05 134 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 OR51B6Q9H340 312 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 DYNLRB1Q9NP97 96 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 IL20RAQ9UHF4 553 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
HMGN3-201ENST00000275036 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 SLC22A23A1A5C7 686 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 IMPA2O14732 288 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 SYNGR3O43761 229 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 SNAP29O95721 258 aa12.38□□□□□ -0.43
HMGN3-201ENST00000275036 NR2C1P13056 603 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms