RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZNRF4Q8WWF5 429 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 CNN2Q99439 309 aaKnown RBP21.87■■□□□ 1.09
SSBP4-201ENST00000270061 ALG8Q9BVK2 526 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 OR51E2Q9H255 320 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 DKKL1Q9UK85 242 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 CAMK2AQ9UQM7 478 aa21.87■■□□□ 1.09
SSBP4-201ENST00000270061 C19orf84I3L1E1 186 aa21.86■■□□□ 1.09
SSBP4-201ENST00000270061 XKRYO14609 159 aa21.86■■□□□ 1.09
SSBP4-201ENST00000270061 ACTL6AO96019 429 aa21.86■■□□□ 1.09
SSBP4-201ENST00000270061 CD79BP40259 229 aa21.86■■□□□ 1.09
SSBP4-201ENST00000270061 OR2T4Q8NH00 348 aa21.86■■□□□ 1.09
SSBP4-201ENST00000270061 SPRYD4Q8WW59 207 aaPredicted RBP21.86■■□□□ 1.09
SSBP4-201ENST00000270061 ALG12Q9BV10 488 aa21.86■■□□□ 1.09
SSBP4-201ENST00000270061 A0A1W2PNV4 684 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 VGLL3A8MV65 326 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 SERPINI2O75830 405 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 MRPL3P09001 348 aaKnown RBP21.85■■□□□ 1.09
SSBP4-201ENST00000270061 COX6B1P14854 86 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 PSMA1P25786 263 aaKnown RBP21.85■■□□□ 1.09
SSBP4-201ENST00000270061 ACVR1BP36896 505 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 CAPZA2P47755 286 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 SF3B4Q15427 424 aaKnown RBP eCLIP21.85■■□□□ 1.097e-7■■■■■ 38.8
SSBP4-201ENST00000270061 PXKQ7Z7A4 578 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 OR51L1Q8NGJ5 315 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 NDNFQ8TB73 568 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 ZFAND2BQ8WV99 257 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 VSX1Q9NZR4 365 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-201ENST00000270061 KIAA1549Q9HCM3 1950 aa21.85■■□□□ 1.09
SSBP4-201ENST00000270061 A0A0G2JNJ9 132 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 FAM90A27PA6NNH2 459 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 ARHGEF9O43307 516 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 AKAP8O43823 692 aaKnown RBP21.84■■□□□ 1.09
SSBP4-201ENST00000270061 TUBA1BP68363 451 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 ZNF85Q03923 595 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 ACSF3Q4G176 576 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-201ENST00000270061 EEF1A1P5Q5VTE0 462 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 LIPKQ5VXJ0 399 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 TUBA1AQ71U36 451 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 UFD1Q92890 307 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 WDYHV1Q96HA8 205 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 PIGQQ9BRB3 760 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 KCNJ16Q9NPI9 418 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 Q9UFV3 132 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 PRSS37A4D1T9 235 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 RIPPLY2Q5TAB7 128 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 DYNC2LI1Q8TCX1 351 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 ZHX1-C8orf76Q96EF9 292 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 OR5B2Q96R09 309 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 BABAM2Q9NXR7 383 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 STUB1Q9UNE7 303 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 RPH3AQ9Y2J0 694 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-201ENST00000270061 FKBP7Q9Y680 259 aa21.84■■□□□ 1.09
SSBP4-201ENST00000270061 TACC2O95359 2948 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 A0A1W2PQL4 384 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-201ENST00000270061 OR2M5A3KFT3 312 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 NKX2-6A6NCS4 301 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 A6NIZ1 184 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 PMS2P2O95744 297 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 PLGP00747 810 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-201ENST00000270061 TFP02787 698 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 TCEA1P23193 301 aaKnown RBP21.83■■□□□ 1.09
SSBP4-201ENST00000270061 PEX19P40855 299 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 CRYBB2P43320 205 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 DAP3P51398 398 aaKnown RBP21.83■■□□□ 1.09
SSBP4-201ENST00000270061 RAP1BP61224 184 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 RAP1AP62834 184 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 GPR50Q13585 617 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 TMEM176BQ3YBM2 270 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-201ENST00000270061 FAM205BPQ63HN1 556 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 TMPPEQ6ZT21 453 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 USP43Q70EL4 1123 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 ZBTB46Q86UZ6 589 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 OR6V1Q8N148 313 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 OR6K6Q8NGW6 343 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 TBX5Q99593 518 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 CHCHD6Q9BRQ6 235 aa21.83■■□□□ 1.09
SSBP4-201ENST00000270061 SF3B6Q9Y3B4 125 aaKnown RBP21.83■■□□□ 1.09
SSBP4-201ENST00000270061 SEC14L5O43304 696 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 GPX5O75715 221 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 AKR7A3O95154 331 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 SHC1P29353 583 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 PYCR1P32322 319 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 CENPAP49450 140 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 P2RY4P51582 365 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 GFRA1P56159 465 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 RAET1LQ5VY80 246 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 NHLRC1Q6VVB1 395 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 SEM1Q6ZVN7 128 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 SLC35F2Q8IXU6 374 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 TSSK2Q96PF2 358 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 SYT4Q9H2B2 425 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 TMEM185BQ9H7F4 350 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 ISG20L2Q9H9L3 353 aaKnown RBP21.82■■□□□ 1.08
SSBP4-201ENST00000270061 SRA1Q9HD15 236 aaKnown RBP21.82■■□□□ 1.08
SSBP4-201ENST00000270061 CREBBPQ92793 2442 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 MED12LQ86YW9 2145 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 DCTN6O00399 190 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 LALBAP00709 142 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 MT-ND5P03915 603 aa21.82■■□□□ 1.08
SSBP4-201ENST00000270061 HLA-DOBP13765 273 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms