RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 RAB3BP20337 219 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 MPLP40238 635 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 C19orf48Q6RUI8 117 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SLC35F2Q8IXU6 374 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SLC37A3Q8NCC5 494 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 OR4N2Q8NGD1 307 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 OR5H2Q8NGV7 314 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 CREB3L1Q96BA8 519 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 WDR76Q9H967 626 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 NOSIPQ9Y314 301 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 RAB11BQ15907 218 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF74Q16587 644 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ATG4DQ86TL0 474 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 LSM14AQ8ND56 463 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR4K15Q8NH41 348 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ST7LQ8TDW4 575 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 NUDT9Q9BW91 350 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SERTAD4Q9NUC0 356 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 PLEK2Q9NYT0 353 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OSGIN1Q9UJX0 560 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TRAV1-2A0A0B4J238 106 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 PRRG2O14669 202 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 FRS3O43559 492 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 UCHL1P09936 223 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 LIMS3P0CW19 117 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 LIMS4P0CW20 117 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 LIPAP38571 399 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR1D5P58170 312 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 MC2RQ01718 297 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SF3A2Q15428 464 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 MPPED2Q15777 294 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CTF1Q16619 201 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR5M10Q6IEU7 315 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CFAP77Q6ZQR2 320 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SMIM15Q7Z3B0 74 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 S100A7AQ86SG5 101 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 MMP21Q8N119 569 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR5B12Q96R08 314 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 PIGQQ9BRB3 760 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SNX11Q9Y5W9 270 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF891A8MT65 544 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 PTP4A3O75365 173 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 UBL3O95164 117 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 RECKO95980 971 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 MAP2K4P45985 399 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CX3CR1P49238 355 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CRYBA2P53672 197 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ACTBP60709 375 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ACTG1P63261 375 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ERV3-1Q14264 604 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SMN1Q16637 294 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 KIRREL2Q6UWL6 708 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 C10orf111Q8N326 155 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 AMER3Q8N944 861 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 DTX3Q8N9I9 347 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR4D6Q8NGJ1 314 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TNFRSF13CQ96RJ3 184 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SF3B5Q9BWJ5 86 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 DHCR7Q9UBM7 475 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TTC28Q96AY4 2481 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TRBV2A0A0J9YWF9 115 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TVP23AA6NH52 213 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 KLRC4-KLRK1H3BQV0 150 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 FFAR1O14842 300 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ACHEP22303 614 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CDC20Q12834 499 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ZP4Q12836 540 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 VWA2Q5GFL6 755 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CD200R1LQ6Q8B3 271 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR1S1Q8NH92 325 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 PIGCQ92535 297 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 MICU1Q9BPX6 476 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TRAF4Q9BUZ4 470 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ATP13A2Q9NQ11 1180 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SLC17A5Q9NRA2 495 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF275Q9NSD4 429 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 COLQQ9Y215 455 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 AHCTF1Q8WYP5 2266 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 OR6C6A6NF89 314 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 FAM171A2A8MVW0 826 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 NAT2P11245 290 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 FCGR2AP12318 317 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 EVI2BP34910 448 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CNN3Q15417 329 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 TSEN54Q7Z6J9 526 aaKnown RBP7.48□□□□□ -1.21
PTPN3-201ENST00000262539 CCDC71LQ8N9Z2 235 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF281Q9Y2X9 895 aa7.48□□□□□ -1.21
PTPN3-201ENST00000262539 SCN5AQ14524 2016 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 G3V3Y1 287 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 H7C2Y5 167 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 SLC43A1O75387 559 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 APOL3O95236 402 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CT45A8P0DMV1 189 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 CT45A9P0DMV2 189 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 DEFA4P12838 97 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF44P15621 663 aa7.47□□□□□ -1.21
PTPN3-201ENST00000262539 PLA2G7Q13093 441 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms