RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZFP57Q9NU63 452 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 HEATR5AQ86XA9 2040 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 TRBV23-1A0A0A0MS06 115 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 A0A1B0GUH1 482 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 CDC14CA4D256 554 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 PRAMEF25A6NGN4 478 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 PEX12O00623 359 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 UBE2CO00762 179 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 HIST1H2ABP04908 130 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 RPS4Y1P22090 263 aaKnown RBP17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 OTX2P32243 289 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 P2RY4P51582 365 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 SNTB2Q13425 540 aaKnown RBP17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 IDNKQ5T6J7 187 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF660Q6AZW8 331 aaPredicted RBP17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 LRRN1Q6UXK5 716 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 HIST3H2AQ7L7L0 130 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 COMTD1Q86VU5 262 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR10K1Q8NGX5 313 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 HIST1H2ACQ93077 130 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 ARHGAP9Q9BRR9 750 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 PINK1Q9BXM7 581 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 ENKD1Q9H0I2 346 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 KCNE5Q9UJ90 142 aa17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 EXOSC1Q9Y3B2 195 aaKnown RBP17.11■□□□□ 0.33
COL4A3BP-201ENST00000261415 GABRPO00591 440 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 DECR1Q16698 335 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 FAM74A1Q5RGS3 127 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 DTX1Q86Y01 620 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 PUSL1Q8N0Z8 303 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 IL22RA1Q8N6P7 574 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 TCEANCQ8N8B7 351 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 GNPDA2Q8TDQ7 276 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 PMM1Q92871 262 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 IMMP1LQ96LU5 166 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 FAM117AQ9C073 453 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 FGF20Q9NP95 211 aaPredicted RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 MRPS18AQ9NVS2 196 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 ASB6Q9NWX5 421 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 DMRT1Q9Y5R6 373 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 DXOO77932 396 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 EPPINO95925 133 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 MMP15P51511 669 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 SNRPEP62304 92 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 RAB40BQ12829 278 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 MAPK14Q16539 360 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR2G6Q5TZ20 316 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 RNF113BQ8IZP6 322 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 NUBPLQ8TB37 319 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 ABHD1Q96SE0 405 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 PIGMQ9H3S5 423 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF443Q9Y2A4 671 aaPredicted RBP17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 EML6Q6ZMW3 1958 aa17.1■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR2M5A3KFT3 312 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 TO15178 435 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 HEXAP06865 529 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 DBIP07108 87 aaKnown RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 THBS1P07996 1170 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 MTNR1BP49286 362 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 PSMA6P60900 246 aaKnown RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 IL10RAQ13651 578 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 EXT1Q16394 746 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 GUCA2BQ16661 112 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF770Q6IQ21 691 aaPredicted RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 NDUFAF7Q7L592 441 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 NKAIN4Q8IVV8 208 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 PRR22Q8IZ63 422 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 WDSUB1Q8N9V3 476 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR6K3Q8NGY3 331 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 MRPS18BQ9Y676 258 aaKnown RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 SPTBN2O15020 2390 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 NSG1A0A0A6YYJ2 146 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 SIGLEC5O15389 551 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 IL33O95760 270 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 IFNW1P05000 195 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 EIF4EP06730 217 aaKnown RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 FOLR2P14207 255 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 IFNGR1P15260 489 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 SMCO1Q147U7 214 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 FAM69AQ5T7M9 428 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF836Q6ZNA1 936 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 SERPINA12Q8IW75 414 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 THAP3Q8WTV1 239 aaPredicted RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 WFDC6Q9BQY6 131 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 POLDIP3Q9BY77 421 aaKnown RBP17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 KCND3Q9UK17 655 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR6C68A6NDL8 312 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 C5orf52A6NGY3 159 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 GPR31O00270 319 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 ARPC5O15511 151 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 SDHBP21912 280 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 EIF2S3P41091 472 aaKnown RBP17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 DEFA6Q01524 100 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 Q6ZTK2 550 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 RHOUQ7L0Q8 258 aa17.08■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR6V1Q8N148 313 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms