RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CMKLR1Q99788 373 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 KLHDC3Q9BQ90 382 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 SCPEP1Q9HB40 452 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 TREM1Q9NP99 234 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 SPACA6W5XKT8 324 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 CSF2RBP32927 897 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 GPR143P51810 404 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 B2MP61769 119 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 PPP1CAP62136 330 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 FAM78AQ5JUQ0 283 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 GLYATL3Q5SZD4 288 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 C11orf87Q6NUJ2 197 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 PARGQ86W56 976 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 OR9A4Q8NGU2 314 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 LILRB1Q8NHL6 650 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-201ENST00000261366 CCDC107Q8WV48 283 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 SEH1LQ96EE3 360 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 GRHPRQ9UBQ7 328 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 CYB5R1Q9UHQ9 305 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 PILRAQ9UKJ1 303 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 TRANK1O15050 2925 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 MYO9BQ13459 2157 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 A0A087WUJ7 227 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 RNF222A6NCQ9 220 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 C17orf51A8MQB3 221 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 CDC40O60508 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
LMNB1-201ENST00000261366 FARS2O95363 451 aaKnown RBP14.4□□□□□ -0.1
LMNB1-201ENST00000261366 PMS2P2O95744 297 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 NAT2P11245 290 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 CBR1P16152 277 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 NFYBP25208 207 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 KIR3DL2P43630 455 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 PLEKHN1Q494U1 663 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-201ENST00000261366 ZCCHC12Q6PEW1 402 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 PM20D2Q8IYS1 436 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 JAGN1Q8N5M9 183 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 THAP6Q8TBB0 222 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 ZBTB8AQ96BR9 441 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 CMBLQ96DG6 245 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 ELOVL3Q9HB03 270 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 MBD2Q9UBB5 411 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 MSRAQ9UJ68 235 aa14.4□□□□□ -0.1
LMNB1-201ENST00000261366 A0A0D9SG52 128 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 TRBV5-5A0A0J9YX44 114 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 TMEM218A2RU14 115 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 MPTX1A8MV57 137 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 ZNF705EA8MWA4 302 aaPredicted RBP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SULT1C2O00338 296 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 CYR61O00622 381 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 BCL2L11O43521 198 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 ACTL6AO96019 429 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 CYB5AP00167 134 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 MAP3K8P41279 467 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SPOCK1Q08629 439 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 MEP1BQ16820 701 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 HFEQ30201 348 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 TMEM31Q5JXX7 168 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SLC35D3Q5M8T2 416 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 OR52W1Q6IF63 320 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 H3F3CQ6NXT2 135 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 KCNRGQ8N5I3 272 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 METTL27Q8N6F8 245 aaPredicted RBP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 OR51A2Q8NGJ7 313 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 C3orf49Q96BT1 292 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SLC6A7Q99884 636 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SLC17A9Q9BYT1 436 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 POTEKPQ9BYX7 375 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 FBXL21Q9UKT6 434 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 TNFSF18Q9UNG2 199 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 DENND4AQ7Z401 1863 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 A0A0B4J2A0 478 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 CPED1A4D0V7 1026 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 URADA6NGE7 173 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 OIP5O43482 229 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SRPX2O60687 465 aaPredicted RBP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 NKX2-2O95096 273 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 ABHD16AO95870 558 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 ITGB2P05107 769 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 CD1AP06126 327 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 HNRNPA1P09651 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 AKR1C4P17516 323 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 AGTR1P30556 359 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 LSSP48449 732 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 EIF2B1Q14232 305 aaKnown RBP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 CDNFQ49AH0 187 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 PAN3Q58A45 887 aaKnown RBP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 CBLN3Q6UW01 205 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 GVQW1Q8N7I0 195 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 OR5M8Q8NGP6 311 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 FAM46BQ96A09 425 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 APOOQ9BUR5 198 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 TMEM106CQ9BVX2 250 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 TLNRD1Q9H1K6 362 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.39□□□□□ -0.11
LMNB1-201ENST00000261366 SHPKQ9UHJ6 478 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 FAM96BQ9Y3D0 163 aa14.39□□□□□ -0.11
LMNB1-201ENST00000261366 C5orf51A6NDU8 294 aa14.38□□□□□ -0.11
LMNB1-201ENST00000261366 ZNF736B4DX44 427 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-201ENST00000261366 SPP1P10451 314 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms