RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PRKACAP17612 351 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 BTN1A1Q13410 526 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 ALKBH6Q3KRA9 238 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 KHDC1LQ5JSQ8 128 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 OR1J2Q8NGS2 313 aa17.12■□□□□ 0.33
SMARCC1-201ENST00000254480 TGFBR1P36897 503 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 RPL27P61353 136 aaKnown RBP17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ELAVL1Q15717 326 aaKnown RBP17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ACSM5Q6NUN0 579 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 GRINAQ7Z429 371 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ATPIF1Q9UII2 106 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 SGCEO43556 437 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 MRPL19P49406 292 aaKnown RBP17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 FAPQ12884 760 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 FCN2Q15485 313 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF454Q8N9F8 522 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 HSD17B11Q8NBQ5 300 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 HPSE2Q8WWQ2 592 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF732B4DXR9 585 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 C2CD4DB7Z1M9 353 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 FAM157BP0CG42 384 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 RPS2P15880 293 aaKnown RBP17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 HSF1Q00613 529 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 OR8G2PQ6IF36 304 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 MED29Q9NX70 200 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 LUZP4Q9P127 313 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 MYOTQ9UBF9 498 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 CORINQ9Y5Q5 1042 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ETHE1O95571 254 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 MTNR1BP49286 362 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 EXT1Q16394 746 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 GJC3Q8NFK1 279 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 GPR119Q8TDV5 335 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 GAB3Q8WWW8 586 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 TEAD3Q99594 435 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 PDFQ9HBH1 243 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 ASH2LQ9UBL3 628 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 HSBP1L1C9JCN9 74 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 H0Y8G0 127 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 SYT5O00445 386 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 RPS19P39019 145 aaKnown RBP17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 SAXO2Q658L1 398 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 EVA1AQ9H8M9 152 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 CHRNA9Q9UGM1 479 aa17.11■□□□□ 0.33
SMARCC1-201ENST00000254480 DEGS1O15121 323 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 SLC16A6O15403 523 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 OR2J2O76002 312 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 LGI1O95970 557 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 DEFA4P12838 97 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 LGALS4P56470 323 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 GNB1P62873 340 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 DEFB109BQ30KR1 87 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 SSX9Q7RTT3 188 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 BSCL2Q96G97 398 aaPredicted RBP17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 POFUT1Q9H488 388 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 LYRM4Q9HD34 91 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF346Q9UL40 294 aaKnown RBP17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 UPRTQ96BW1 309 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 C1QTNF3Q9BXJ4 246 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 RNF212BA8MTL3 300 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 NFYAP23511 347 aaPredicted RBP17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 KDM4DQ6B0I6 523 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 OR13F1Q8NGS4 319 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 SLC25A37Q9NYZ2 338 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 TCRBP04435 133 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 NPBWR1P48145 328 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 XKR7Q5GH72 579 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 ACER3Q9NUN7 267 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 TAS2R30P59541 319 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 SYT14P1Q58G82 188 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 HACD4Q5VWC8 232 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 LIPNQ5VXI9 398 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 C5orf46Q6UWT4 87 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 GDPD3Q7L5L3 318 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 MAML2Q8IZL2 1156 aaPredicted RBP17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 CSF3RQ99062 836 aa17.1■□□□□ 0.33
SMARCC1-201ENST00000254480 LOC100289279A0A1B0GTE1 492 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 HTR4Q13639 388 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 HABP2Q14520 560 aaPredicted RBP17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 ARHGAP11BQ3KRB8 267 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 SLC19A3Q9BZV2 496 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 ERVMER34-1Q9H9K5 563 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 A0A0B4J203 849 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 GFYI3L273 518 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 TNFSF11O14788 317 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 HRO43593 1189 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 EMDP50402 254 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF169Q14929 603 aaPredicted RBP17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 FBXL6Q8N531 539 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 OR51S1Q8NGJ8 323 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 ORAI1Q96D31 301 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 HIPK2Q9H2X6 1198 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 CRYZL1O95825 349 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 UBE2KP61086 200 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 ZNF74Q16587 644 aa17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 IAH1Q2TAA2 248 aaPredicted RBP17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 PTRH1Q86Y79 214 aaKnown RBP17.09■□□□□ 0.33
SMARCC1-201ENST00000254480 NAXDQ8IW45 347 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms