RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SPIN3Q5JUX0 258 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 YOD1Q5VVQ6 348 aaPredicted RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 SLC18B1Q6NT16 456 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 C19orf48Q6RUI8 117 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 POGLUT1Q8NBL1 392 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SMRP1Q8NCR6 262 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 DEFB124Q8NES8 71 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 OR5M9Q8NGP3 310 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 LCORQ96JN0 433 aaPredicted RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 FBXL3Q9UKT7 428 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SPAG17Q6Q759 2223 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 A8MXK9 166 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 NUDT19A8MXV4 375 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 HCRTR1O43613 425 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 ATP1B1P05026 303 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 DPP4P27487 766 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 DAP3P51398 398 aaKnown RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 MBOAT2Q6ZWT7 520 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SIRT6Q8N6T7 355 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 CD300LFQ8TDQ1 290 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SENP5Q96HI0 755 aaPredicted RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 STACQ99469 402 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 TGIF2Q9GZN2 237 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SVILO95425 2214 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 TRAV27A0A087WT01 109 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 CCDC187A0A096LP49 1063 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 EEF1E1-BLOC1S5C9J1V9 151 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 GPR31O00270 319 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 HMGN4O00479 90 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 WISP3O95389 354 aaPredicted RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 CRABP1P29762 137 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SOX18P35713 384 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 C12orf73Q69YU5 71 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 SDR9C7Q8NEX9 313 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 OR9K2Q8NGE7 335 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 OR51M1Q9H341 326 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 HRASLSQ9HDD0 168 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 PLEK2Q9NYT0 353 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 DHDHQ9UQ10 334 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 LSM2Q9Y333 95 aaKnown RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 PLXNA1Q9UIW2 1896 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 C13orf42A0A1B0GVH6 325 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 A6NIZ1 184 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 HMSDA8MTL9 139 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 KLK10O43240 276 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 MAOAP21397 527 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 TRHRP34981 398 aaPredicted RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 RAP1BP61224 184 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 RAP1AP62834 184 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 TRMT12Q53H54 448 aaKnown RBP10.05□□□□□ -0.8
COPA-201ENST00000241704 ZNF565Q8N9K5 539 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 GABRG3Q99928 467 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 EGLN3Q9H6Z9 239 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 OR2S2Q9NQN1 319 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 MED17Q9NVC6 651 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 TAS2R5Q9NYW4 299 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 EMC9Q9Y3B6 208 aa10.05□□□□□ -0.8
COPA-201ENST00000241704 IGHV3-20A0A0C4DH32 117 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 PLSCR5A0PG75 271 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 PIAS2O75928 621 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 CSF1P09603 554 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 THBS2P35442 1172 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 SMAD2Q15796 467 aaKnown RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 GLDNQ6ZMI3 551 aaPredicted RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 DPPA2Q7Z7J5 298 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 AKR7LQ8NHP1 331 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 STT3BQ8TCJ2 826 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 INTS12Q96CB8 462 aaKnown RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 DYNLRB1Q9NP97 96 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 PAPLNO95428 1278 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 MYF5P13349 255 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 VAMP1P23763 118 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 CSF2RBP32927 897 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 GFERP55789 205 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 TIAL1Q01085 375 aaKnown RBP eCLIP10.04□□□□□ -0.82e-7■■■■□ 26.7
COPA-201ENST00000241704 TMEM71Q6P5X7 295 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 MEPCEQ7L2J0 689 aaKnown RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 SLC35F2Q8IXU6 374 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 ACBD4Q8NC06 268 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 ABHD4Q8TB40 342 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 HOXB13Q92826 284 aaPredicted RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 SPTSSAQ969W0 71 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 ZNF775Q96BV0 537 aaPredicted RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 COX14Q96I36 57 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 OPA3Q9H6K4 179 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 PARPBPQ9NWS1 579 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 ARID2Q68CP9 1835 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 NSA2O95478 260 aaKnown RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 SNRNP70P08621 437 aaKnown RBP10.04□□□□□ -0.8
COPA-201ENST00000241704 CD22P20273 847 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 SIRPAP78324 504 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 MELKQ14680 651 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 DUSP5Q16690 384 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 KCTD9Q7L273 389 aa10.04□□□□□ -0.8
COPA-201ENST00000241704 OLIG3Q7RTU3 272 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms