RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TTC3P53804 2025 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 A0A1W2PQH9 124 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 MSGN1A6NI15 193 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 EEF1E1-BLOC1S5C9J1V9 151 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 SYT7O43581 403 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 CA11O75493 328 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 DIRAS3O95661 229 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 ZGLP1P0C6A0 271 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 IL9P15248 144 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 THBS4P35443 961 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 BACE1P56817 501 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 ZNF280AP59817 542 aaPredicted RBP11.83□□□□□ -0.52
MSH2-201ENST00000233146 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 CHST13Q8NET6 341 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
MSH2-201ENST00000233146 GLRX2Q9NS18 164 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 SCML2Q9UQR0 700 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 TRBV2A0A0J9YWF9 115 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 A0A1W2PPQ1 181 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 H0YIZ8 118 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 RAB6AP20340 208 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 ADCYAP1R1P41586 468 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 ETFRF1Q6IPR1 90 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 C16orf54Q6UWD8 224 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 ZNF573Q86YE8 665 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 COMMD1Q8N668 190 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 OR13C2Q8NGS9 318 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 OR5K2Q8NHB8 316 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 SUSD6Q92537 303 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 DIO2Q92813 273 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 CBLN4Q9NTU7 201 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 AMDHD2Q9Y303 409 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 IL2RAP01589 272 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 EPHA1P21709 976 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 IGFALSP35858 605 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 OR3A1P47881 315 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 LTBQ06643 244 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 SGCGQ13326 291 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 ZNF774Q6NX45 483 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 RPL22L1Q6P5R6 122 aaKnown RBP11.82□□□□□ -0.52
MSH2-201ENST00000233146 DEGS2Q6QHC5 323 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 LBX2Q6XYB7 198 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 VRK2Q86Y07 508 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 THOC3Q96J01 351 aaKnown RBP11.82□□□□□ -0.52
MSH2-201ENST00000233146 RRP8O43159 456 aaKnown RBP11.82□□□□□ -0.52
MSH2-201ENST00000233146 ZNF821O75541 412 aaPredicted RBP11.82□□□□□ -0.52
MSH2-201ENST00000233146 AIFM1O95831 613 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 TBX6O95947 436 aaPredicted RBP11.82□□□□□ -0.52
MSH2-201ENST00000233146 DCNP07585 359 aaKnown RBP11.82□□□□□ -0.52
MSH2-201ENST00000233146 CLTBP09497 229 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 TAS2R19P59542 299 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 ACTC1P68032 377 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 ACTA1P68133 377 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 LYPLAL1Q5VWZ2 237 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 OLIG3Q7RTU3 272 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 HMGN2P46Q86SG4 172 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 SPPL3Q8TCT6 385 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 CD300LFQ8TDQ1 290 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 CDC6Q99741 560 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 PRM3Q9NNZ6 103 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 CASP8AP2Q9UKL3 1982 aa11.82□□□□□ -0.52
MSH2-201ENST00000233146 GPANK1O95872 356 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 WNT11O96014 354 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ZNF735P0CB33 412 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 NPY4RP50391 375 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SNRPNP63162 240 aaKnown RBP11.81□□□□□ -0.52
MSH2-201ENST00000233146 ZNF311Q5JNZ3 666 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 TPGS1Q6ZTW0 290 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 FAM129CQ86XR2 697 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ZCCHC10Q8TBK6 192 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SKA2Q8WVK7 121 aaPredicted RBP11.81□□□□□ -0.52
MSH2-201ENST00000233146 FRZBQ92765 325 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 DIRC2Q96SL1 478 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 TAF9BQ9HBM6 251 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 CDC42EP2O14613 210 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ABLIM3O94929 683 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 HNF1AP20823 631 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 BUD31P41223 144 aaPredicted RBP11.81□□□□□ -0.52
MSH2-201ENST00000233146 SLC16A1P53985 500 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ST3GAL3Q11203 375 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 DECR1Q16698 335 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 IER5LQ5T953 404 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ARMC6Q6NXE6 501 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 ANKRD16Q6P6B7 361 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 TMEM205Q6UW68 189 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
MSH2-201ENST00000233146 NRMQ8IXM6 262 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 AQP10Q96PS8 301 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SERINC2Q96SA4 455 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 GPR174Q9BXC1 333 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 SLC5A7Q9GZV3 580 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 IL26Q9NPH9 171 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 P2RX2Q9UBL9 471 aa11.81□□□□□ -0.52
MSH2-201ENST00000233146 MRPS33Q9Y291 106 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms