RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 SCARB1Q8WTV0 552 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 LINC00615Q96LM1 132 aaPredicted RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 RNF32Q9H0A6 362 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 ACKR4Q9NPB9 350 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 FBXL4Q9UKA2 621 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 FAM183AA6NL82 134 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 GFYI3L273 518 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 I6L893 689 aaPredicted RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 ENSAO43768 121 aaKnown RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 IGLV3-27P01718 113 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 SDHAP31040 664 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 TAGLN2P37802 199 aaKnown RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 TGM4P49221 684 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 NOVA1P51513 510 aaKnown RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 EPHA5P54756 1037 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 HTRA4P83105 476 aaPredicted RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 GAB1Q13480 694 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 RTL8BQ17RB0 113 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 LRRC26Q2I0M4 334 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 STEAP3Q658P3 488 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 TRNP1Q6NT89 227 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 SYT9Q86SS6 491 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 BAHD1Q8TBE0 780 aaPredicted RBP6.63□□□□□ -1.35
CPS1-201ENST00000233072 MZB1Q8WU39 189 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 SLC35E1Q96K37 410 aa6.63□□□□□ -1.35
CPS1-201ENST00000233072 DOCK2Q92608 1830 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TCHHQ07283 1943 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SOCS7O14512 581 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SH2D1BO14796 132 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TCRBP04435 133 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 CYC1P08574 325 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 CD1CP29017 333 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 MRPL19P49406 292 aaKnown RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 RAB13P51153 203 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OR8G1Q15617 311 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OR2G6Q5TZ20 316 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 FAM111BQ6SJ93 734 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 GLIPR1L1Q6UWM5 242 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SYT13Q7L8C5 426 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 LMNTD1Q8N9Z9 388 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OR1M1Q8NGA1 313 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SLC25A46Q96AG3 418 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 MRGPRX4Q96LA9 322 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 PHF7Q9BWX1 381 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 QRSL1Q9H0R6 528 aaKnown RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 HRH4Q9H3N8 390 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 POFUT1Q9H488 388 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 PLK3Q9H4B4 646 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 ZNF576Q9H609 170 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 METTL17Q9H7H0 456 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 FN3KRPQ9HA64 309 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.62□□□□□ -1.35
CPS1-201ENST00000233072 SMCO4Q9NRQ5 59 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 PROCRQ9UNN8 238 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 MED16Q9Y2X0 877 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TUBAL3A6NHL2 446 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 PRSS44E7EML9 344 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 ACOT8O14734 319 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 PHF1O43189 567 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 SULT1C4O75897 302 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 C21orf33P30042 268 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 NKX2-5P52952 324 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 HSF1Q00613 529 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 ZNF85Q03923 595 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SQSTM1Q13501 440 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OGFOD3Q6PK18 319 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 ZNF574Q6ZN55 896 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 ZNF620Q6ZNG0 422 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 DCXRQ7Z4W1 244 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 CA13Q8N1Q1 262 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 DNAJC5GQ8N7S2 189 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OR13H1Q8NG92 308 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 CMTM2Q8TAZ6 248 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 LIPHQ8WWY8 451 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 C11orf40Q8WZ69 217 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TMEM106AQ96A25 262 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 CMTM3Q96MX0 182 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OXGR1Q96P68 337 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 DCBLD2Q96PD2 775 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 RIMS4Q9H426 269 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 LIN7CQ9NUP9 197 aaKnown RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 CHRNA9Q9UGM1 479 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SNX11Q9Y5W9 270 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 KPTNQ9Y664 436 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 MN1Q10571 1320 aaPredicted RBP6.62□□□□□ -1.35
CPS1-201ENST00000233072 ZNF732B4DXR9 585 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 ADAM12O43184 909 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 FADS1O60427 444 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 GJB3O75712 270 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 MBP02144 154 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SLC6A12P48065 614 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 SHHQ15465 462 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 NKAIN2Q5VXU1 208 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TMEM130Q8N3G9 435 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 OIT3Q8WWZ8 545 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 TMEM43Q9BTV4 400 aa6.62□□□□□ -1.35
CPS1-201ENST00000233072 PDFQ9HBH1 243 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms