RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 VSX1Q9NZR4 365 aaPredicted RBP11.96□□□□□ -0.49
UPK1A-201ENST00000222275 ALPK2Q86TB3 2170 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 SLC22A23A1A5C7 686 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 EI24O14681 340 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 CASKO14936 926 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 LYZL6O75951 148 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 GOSR1O95249 250 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 WNT11O96014 354 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 TP53P04637 393 aaPredicted RBP11.95□□□□□ -0.5
UPK1A-201ENST00000222275 ALPLP05186 524 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 ITGA5P08648 1049 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 ZNF3P17036 446 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 PAICSP22234 425 aaKnown RBP11.95□□□□□ -0.5
UPK1A-201ENST00000222275 CENPAP49450 140 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 ADAM8P78325 824 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 CDK5Q00535 292 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 RUNX1T1Q06455 604 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 SLC34A1Q06495 639 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 RIPK1Q13546 671 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 TSC22D1Q15714 1073 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 GABRA6Q16445 453 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 PGGHGQ32M88 737 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 MESTQ5EB52 335 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 LRFN4Q6PJG9 635 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 OR8D4Q8NGM9 314 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 OR1K1Q8NGR3 316 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
UPK1A-201ENST00000222275 RASD2Q96D21 266 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 RDH12Q96NR8 316 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 FOXB1Q99853 325 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 MED18Q9BUE0 208 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 CMC2Q9NRP2 79 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 AMDHD2Q9Y303 409 aa11.95□□□□□ -0.5
UPK1A-201ENST00000222275 OR5H1A6NKK0 313 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 KHDRBS3O75525 346 aaKnown RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 RAD51DO75771 328 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 PLAUP00749 431 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 HIST1H1CP16403 213 aaKnown RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 CRYGSP22914 178 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 DNASE1P24855 282 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 BLVRAP53004 296 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 UBE2NP61088 152 aaKnown RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 ARF1P84077 181 aaKnown RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 NPRL3Q12980 569 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 PTGES3Q15185 160 aaKnown RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 LEG1Q6P5S2 330 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 TGIF2LYQ8IUE0 185 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 WFDC11Q8NEX6 87 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 OR2T4Q8NH00 348 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 OR4K13Q8NH42 304 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 S100PBPQ96BU1 408 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 NMD3Q96D46 503 aaKnown RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 WACQ9BTA9 647 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 GABARAPL3Q9BY60 117 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 KCNN2Q9H2S1 579 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 VCX3BQ9H321 246 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 RNPEPL1Q9HAU8 725 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 TMEFF2Q9UIK5 374 aaPredicted RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
UPK1A-201ENST00000222275 NSD1Q96L73 2696 aaPredicted RBP11.94□□□□□ -0.5
UPK1A-201ENST00000222275 CASQ2O14958 399 aaPredicted RBP11.93□□□□□ -0.5
UPK1A-201ENST00000222275 SLC16A7O60669 478 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 OR8G3PP0DMU2 310 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 CDKN2AP42771 156 aaKnown RBP11.93□□□□□ -0.5
UPK1A-201ENST00000222275 MRPS34P82930 218 aaKnown RBP11.93□□□□□ -0.5
UPK1A-201ENST00000222275 LGALS3BPQ08380 585 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 DEFB113Q30KQ7 82 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 PHYHD1Q5SRE7 291 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 SLC35F1Q5T1Q4 408 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 LINGO2Q7L985 606 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 OR4Q3Q8NH05 313 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 BCL2L2Q92843 193 aaPredicted RBP11.93□□□□□ -0.5
UPK1A-201ENST00000222275 PIK3IP1Q96FE7 263 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 NMNAT3Q96T66 252 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 SYT4Q9H2B2 425 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 SIAEQ9HAT2 523 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 DLL4Q9NR61 685 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 TMEM38BQ9NVV0 291 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 FBXL3Q9UKT7 428 aa11.93□□□□□ -0.5
UPK1A-201ENST00000222275 JMJD1CQ15652 2540 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 ARPC4-TTLL3A0A0A6YYG9 625 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 ZAR1LA6NP61 321 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 MITFO75030 526 aaPredicted RBP11.92□□□□□ -0.5
UPK1A-201ENST00000222275 RAF1P04049 648 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
UPK1A-201ENST00000222275 SLC25A1P53007 311 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 GLO1Q04760 184 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 PPA1Q15181 289 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 SNAPC1Q16533 368 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 TBRG1Q3YBR2 411 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 SLC36A2Q495M3 483 aa11.92□□□□□ -0.5
UPK1A-201ENST00000222275 SLX4IPQ5VYV7 408 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms