RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Olfr1359Q7TQU5 313 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Dlgap2Q8BJ42 1059 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm5111Q8C9M4 190 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Hpf1Q8CFE2 346 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 PpcsQ8VDG5 311 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Chrdl2Q8VEA6 426 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr1484Q8VEU6 315 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr862Q8VFJ1 306 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr644Q8VH21 314 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Znf24Q91VN1 368 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Cdca5Q9CPY3 264 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Plekhj1Q9D240 164 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Slco1b2Q9JJL3 689 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gpc6Q9R087 555 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 ClcnkaQ9WUB7 687 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Apc2Q9Z1K7 2274 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm436B1AVU6 407 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tmem8bB1AWJ5 472 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm45062E0CZ38 131 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 H2-LP01897 362 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 4930480E11RikQ0VG34 394 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Ankrd27Q3UMR0 1048 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fam20cQ5MJS3 579 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Il11ra1Q64385 432 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Zfp866Q6PGD2 520 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Opn5Q6VZZ7 377 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Eid2Q6X7S9 236 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Abhd17cQ8VCV1 320 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr1387Q8VFA9 311 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Pole4Q9CQ36 118 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Dimt1Q9D0D4 313 aaKnown RBP20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Q9DAY5 185 aa20.43■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Ppp1r3dA2AJW4 279 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Mettl7a3G3X9G9 244 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rad51dO55230 329 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 ChrndP02716 520 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fcer1aP20489 250 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Pax7P47239 503 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Acta2P62737 377 aaKnown RBP20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Actg2P63268 376 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Cnn2Q08093 305 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rpa2Q62193 270 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rrm2bQ6PEE3 351 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr32Q7TQZ0 308 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Slc35f4Q8BZK4 485 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 BanpQ8VBU8 548 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr214Q8VG27 320 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Spryd4Q91WK1 207 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Abhd3Q91ZH7 411 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Ube2fQ9CY34 185 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Batf3Q9D275 118 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rnf128Q9D304 428 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rtl8cQ9D6I0 112 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Cpn2Q9DBB9 547 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Icam4Q9ERM2 262 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Praf2Q9JIG8 178 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tmem176bQ9R1Q6 263 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Pramef6A2A8M8 474 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fgf9P54130 208 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Dmrtc1bQ2PMX6 267 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tgtp2Q3T9E4 415 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Mbd6Q3TY92 1003 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Nxpe2Q3U095 558 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tgtp1Q62293 415 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr884Q7TRE1 309 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Kctd7Q8BJK1 289 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 MepeQ8K4L6 441 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr1261Q8VFB0 306 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr791Q8VGJ0 312 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Slc29a3Q99P65 475 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Ier3ip1Q9CR20 82 aa20.42■□□□□ 0.86
Scn1b-201ENSMUST00000098548 AcacbE9Q4Z2 2448 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Mfsd13bA0A1L1SUA2 455 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr239A0PK55 315 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 DytnA2CI98 653 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm4177D3YTX5 305 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r127K7N6J5 305 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr55K7N6Q1 315 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r142K7N6U0 305 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r94K7N6X3 305 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r115K7N6Y3 295 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r159K7N701 305 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 MfngO09008 321 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 AdaP03958 352 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gpd1P13707 349 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Rps3aP97351 264 aaKnown RBP20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Hddc2Q3SXD3 199 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm10750Q3V0I0 133 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Kcnc3Q63959 769 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r42Q8VBS7 329 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr63Q8VBW9 316 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr1079Q8VF52 315 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Steap1Q9CWR7 339 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Med18Q9CZ82 208 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tmem27Q9ESG4 222 aa20.41■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fam90a1aA2A4E2 429 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Cd209fD3Z1H5 274 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Prss56F2YMG0 604 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm8888J3QPX5 126 aa20.4■□□□□ 0.86
Scn1b-201ENSMUST00000098548 BckdkO55028 412 aa20.4■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms