RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tex13aA2AFS9 377 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Scml2B1AVB3 969 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Slco5a1E9PVD9 850 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Rarres1F6ZIS7 283 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Fgf3P05524 245 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Slc2a6Q3UDF0 497 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Cachd1Q6PDJ1 1288 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1219Q7TR04 311 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr517Q7TRU4 314 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 HeltQ7TS99 240 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Lsm10Q8QZX5 122 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Chrm5Q920H4 532 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Hrasls5Q9CPX5 270 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Rbm18Q9CR83 190 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Nmrk2Q9D7C9 195 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Jmjd6Q9ERI5 403 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 PlpbpQ9Z2Y8 274 aa14.98□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1432A0A140LHS7 346 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Gm5799E9Q2M1 201 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr550E9Q544 316 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Pip5k1cO70161 661 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Cxcl12P40224 93 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Trappc6aQ78XR0 159 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Gpr107Q8BUV8 551 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1351Q8VGU6 319 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr558Q8VGZ7 317 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Rab14Q91V41 215 aaKnown RBP14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 NcmapQ99JS0 100 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Ceacam18Q9D871 376 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Vmn1r56Q9EPS9 310 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Chd7A2AJK6 2986 aaKnown RBP14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Kcnj15O88932 375 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Hoxb6P09023 224 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Mep1aP28825 747 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 EpxP49290 716 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Actc1P68033 377 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Acta1P68134 377 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Tmem164Q6PHN7 296 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Cnppd1Q8K158 407 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Vmn1r59Q8R2B9 310 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1504Q8VFQ4 315 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Efcab11Q9D0E5 162 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Slc15a1Q9JIP7 709 aa14.97□□□□□ -0.01
Shh-201ENSMUST00000002708 Zfp300A2AE21 645 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Omt2aF6ZJR3 104 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 5830473C10RikF8VQ07 620 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Msl3l2G3X992 371 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 St8sia2O35696 375 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Cd1d1P11609 336 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Cd1d2P11610 336 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Atp5j2P56135 88 aaKnown RBP14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Csrp2P97314 193 aaKnown RBP14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Masp1P98064 704 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Cass4Q08EC4 804 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Rnf166Q3U9F6 237 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Them4Q3UUI3 230 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Dyrk1aQ61214 763 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Tssk1bQ61241 365 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr993Q8VF75 314 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr165Q8VFA2 313 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr578Q8VH17 313 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Pycr1Q922W5 309 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 CmipQ9D486 773 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 TfecQ9WTW4 317 aa14.96□□□□□ -0.01
Shh-201ENSMUST00000002708 Iglc4A0A0G2JEK5 104 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1234A2AVK5 314 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Susd1E9Q3H4 752 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Znf296E9Q6W4 445 aaKnown RBP14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 H2-Q10P01898 325 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Il9P15247 144 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Pou2f1P25425 770 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 HfeP70387 359 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 NfkbidQ2TB02 327 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc38a8Q5HZH7 432 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Cyb5d2Q5SSH8 263 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Npepl1Q6NSR8 524 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Heatr6Q6P1G0 1184 aaKnown RBP14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Zfp947Q8BIQ6 437 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Lhfpl6Q8BM86 200 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Dzank1Q8C008 778 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Hist1h2ahQ8CGP6 128 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Serinc2Q8K0E7 450 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn1r210Q8R274 306 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr849Q8VFF6 312 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1090Q8VGA6 313 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Plpp7Q91WB2 271 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Lcn8Q924P3 175 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Ndufb2Q9CPU2 105 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 SmpxQ9DC77 85 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Psma6Q9QUM9 246 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Eci2Q9WUR2 391 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Padi1Q9Z185 662 aa14.96□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm17949A0A1B0GRV7 212 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1224-ps1A3KGY4 311 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr738L7N1X7 311 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Klf9O35739 244 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Zp3P10761 424 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 TpbpaP13438 124 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Ca3P16015 260 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Anxa11P97384 503 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms