RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 FAM162AQ96A26 154 aa21.73■■□□□ 1.07
VEGFA-232ENST00000640653 HSH2DQ96JZ2 352 aa21.73■■□□□ 1.07
VEGFA-232ENST00000640653 FOXN4Q96NZ1 517 aa21.73■■□□□ 1.07
VEGFA-232ENST00000640653 MRPL37Q9BZE1 423 aaKnown RBP21.73■■□□□ 1.07
VEGFA-232ENST00000640653 NSRP1Q9H0G5 558 aaKnown RBP21.73■■□□□ 1.07
VEGFA-232ENST00000640653 KCNN2Q9H2S1 579 aa21.73■■□□□ 1.07
VEGFA-232ENST00000640653 SMURF2Q9HAU4 748 aa21.73■■□□□ 1.07
VEGFA-232ENST00000640653 SLC22A23A1A5C7 686 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 GMNCA6NCL1 334 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 SYNGR3O43761 229 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 ADRA2AP08913 450 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 DAOP14920 347 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 CD47Q08722 323 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 TOP3AQ13472 1001 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-232ENST00000640653 FXNQ16595 210 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 ANKDD1AQ495B1 522 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 CYP4Z1Q86W10 505 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 HIPK1Q86Z02 1210 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 NRMQ8IXM6 262 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 RNF113BQ8IZP6 322 aaKnown RBP21.72■■□□□ 1.07
VEGFA-232ENST00000640653 ZCCHC24Q8N2G6 241 aaKnown RBP21.72■■□□□ 1.07
VEGFA-232ENST00000640653 FAM107BQ9H098 131 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 MYLK2Q9H1R3 596 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 MAN2C1Q9NTJ4 1040 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 ABCD2Q9UBJ2 740 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 ADAM21Q9UKJ8 722 aa21.72■■□□□ 1.07
VEGFA-232ENST00000640653 KIAA1324LA8MWY0 1029 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-232ENST00000640653 M0R233 179 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 IGHV4-31P0DP07 118 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 MAKP20794 623 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 PRDX6P30041 224 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 GZMKP49863 264 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 SEC24CP53992 1094 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 PSME3P61289 254 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 PLP2Q04941 152 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 PRKCDQ05655 676 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 IQCCQ4KMZ1 466 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 ZNF730Q6ZMV8 503 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 RBM15BQ8NDT2 890 aaKnown RBP21.71■■□□□ 1.07
VEGFA-232ENST00000640653 OR1J2Q8NGS2 313 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 ACOT11Q8WXI4 607 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-232ENST00000640653 HDAC2Q92769 488 aaKnown RBP21.71■■□□□ 1.07
VEGFA-232ENST00000640653 ALG12Q9BV10 488 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 CDH20Q9HBT6 801 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 REV1Q9UBZ9 1251 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 RPS6KA6Q9UK32 745 aa21.71■■□□□ 1.07
VEGFA-232ENST00000640653 ABCA2Q9BZC7 2435 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 ANK3Q12955 4377 aaKnown RBP21.7■■□□□ 1.06
VEGFA-232ENST00000640653 IQCMA0A1B0GVH7 501 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 EFCAB9A8MZ26 197 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 FFAR1O14842 300 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 SLC2A10O95528 541 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 STAMBPO95630 424 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 IGHMP01871 453 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 SLC9A3P48764 834 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 CTXN1P60606 82 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 RPL27P61353 136 aaKnown RBP21.7■■□□□ 1.06
VEGFA-232ENST00000640653 MRPS34P82930 218 aaKnown RBP21.7■■□□□ 1.06
VEGFA-232ENST00000640653 MSMPQ1L6U9 139 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 TBC1D28Q2M2D7 210 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 FAM205BPQ63HN1 556 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 OAFQ86UD1 273 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 LRRC18Q8N456 261 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 FNDC8Q8TC99 324 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 KCNK17Q96T54 332 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 SYT3Q9BQG1 590 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 LRMDAQ9H2I8 198 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 MS4A5Q9H3V2 200 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 SIAEQ9HAT2 523 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 SPAG4Q9NPE6 437 aa21.7■■□□□ 1.06
VEGFA-232ENST00000640653 ABCA1O95477 2261 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 CHD3Q12873 2000 aaKnown RBP21.69■■□□□ 1.06
VEGFA-232ENST00000640653 APEHP13798 732 aaKnown RBP21.69■■□□□ 1.06
VEGFA-232ENST00000640653 FUT4P22083 530 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 CHRFAM7AQ494W8 412 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 MBOAT2Q6ZWT7 520 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 RRM2BQ7LG56 351 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 CPLX4Q7Z7G2 160 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 OR51A7Q8NH64 312 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 UBASH3BQ8TF42 649 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 NMD3Q96D46 503 aaKnown RBP21.69■■□□□ 1.06
VEGFA-232ENST00000640653 RBP7Q96R05 134 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 BPESC1Q9GZL8 116 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 TPK1Q9H3S4 243 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 ANKRD19PQ9H560 264 aa21.69■■□□□ 1.06
VEGFA-232ENST00000640653 ZNF346Q9UL40 294 aaKnown RBP21.69■■□□□ 1.06
VEGFA-232ENST00000640653 TRAV27A0A087WT01 109 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 A0A087WUU8 490 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 SNX3O60493 162 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 GMNNO75496 209 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 PRSS23O95084 383 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 IGFBP1P08833 259 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-232ENST00000640653 NCK1P16333 377 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 ZNF16P17020 682 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-232ENST00000640653 GIFP27352 417 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 HSF2Q03933 536 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 FMODQ06828 376 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 THEM4Q5T1C6 240 aa21.68■■□□□ 1.06
VEGFA-232ENST00000640653 RGS7BPQ6MZT1 257 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-232ENST00000640653 ZNF786Q8N393 782 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms