RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ARL5BQ96KC2 179 aa12.44□□□□□ -0.42
ATRIP-208ENST00000639561 TTYH2Q9BSA4 534 aa12.44□□□□□ -0.42
ATRIP-208ENST00000639561 C11orf54Q9H0W9 315 aaPredicted RBP12.44□□□□□ -0.42
ATRIP-208ENST00000639561 VDAC3Q9Y277 283 aa12.44□□□□□ -0.42
ATRIP-208ENST00000639561 KCNMB2Q9Y691 235 aa12.44□□□□□ -0.42
ATRIP-208ENST00000639561 CFAP46Q8IYW2 2715 aa12.44□□□□□ -0.42
ATRIP-208ENST00000639561 GCN1Q92616 2671 aaKnown RBP12.44□□□□□ -0.42
ATRIP-208ENST00000639561 TRAV1-2A0A0B4J238 106 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 PLPP3O14495 311 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 PLA2G10O15496 165 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 SLC19A2O60779 497 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 UPK3AO75631 287 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 ZFAND5O76080 213 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 AHSA1O95433 338 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 EIF4EP06730 217 aaKnown RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 RAB3BP20337 219 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 MAGEB1P43366 347 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 RIN1Q13671 783 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 DPY19L4Q7Z388 723 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 OR5L2Q8NGL0 311 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 OR6N2Q8NGY6 317 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 TMEM234Q8WY98 164 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 ST8SIA1Q92185 356 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 ORAI1Q96D31 301 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 MRPL48Q96GC5 212 aaKnown RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 FREM3P0C091 2139 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 PRSS37A4D1T9 235 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 SHISA8B8ZZ34 492 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 XKRYO14609 159 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 RPP14O95059 124 aaKnown RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 RAB40ALP0C0E4 278 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 HLA-DOBP13765 273 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 NAGAP17050 411 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 PTGDSP41222 190 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 HTR3AP46098 478 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 FOXF1Q12946 379 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 LIPNQ5VXI9 398 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 ZNF517Q6ZMY9 492 aaPredicted RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 KDM8Q8N371 416 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 SAMD12Q8N8I0 201 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 FOXN4Q96NZ1 517 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 TXNIPQ9H3M7 391 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 CYSLTR2Q9NS75 346 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 KLRF1Q9NZS2 232 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 EXTL2Q9UBQ6 330 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 FARSAQ9Y285 508 aaKnown RBP12.43□□□□□ -0.42
ATRIP-208ENST00000639561 MED12Q93074 2177 aa12.43□□□□□ -0.42
ATRIP-208ENST00000639561 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 A0A0X1KG70 313 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 FAM25AB3EWG3 89 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 FAM25CB3EWG5 89 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 FAM25GB3EWG6 89 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 PIN1P1O15428 100 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 GATBO75879 557 aaKnown RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 HLA-DQB1P01920 261 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ATF1P18846 271 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ALOX5APP20292 161 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 PAMR1Q6UXH9 720 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 LRRC28Q86X40 367 aaPredicted RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 DTX3Q8N9I9 347 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 OR4M2Q8NGB6 313 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 MAP6Q96JE9 813 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 AMELYQ99218 206 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 TSPAN10Q9H1Z9 355 aaPredicted RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 C19orf25Q9UFG5 118 aaPredicted RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 A0A0B4J203 849 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 A0A1B0GVC2 190 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 A6NIN4 97 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ACOD1A6NK06 481 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 OR2T1O43869 369 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 GPRIN2O60269 458 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 PTBP1P26599 531 aaKnown RBP eCLIP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 SUMO3P55854 103 aaPredicted RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 TPTEP56180 551 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 MELKQ14680 651 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 FAM198BQ6UWH4 519 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 UNQ9370/PRO34162Q6UXP9 181 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 UBE2J2Q8N2K1 259 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 OR4M1Q8NGD0 313 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 TRMT10AQ8TBZ6 339 aaKnown RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 INTS14Q96SY0 518 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 WDR54Q9H977 334 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 NOX4Q9NPH5 578 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 MRPL39Q9NYK5 338 aaKnown RBP12.42□□□□□ -0.42
ATRIP-208ENST00000639561 KCNG2Q9UJ96 466 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 LAMP5Q9UJQ1 280 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ADAM30Q9UKF2 790 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 B9D1Q9UPM9 204 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 ZNF281Q9Y2X9 895 aa12.42□□□□□ -0.42
ATRIP-208ENST00000639561 A0A1B0GTH9 108 aa12.41□□□□□ -0.42
ATRIP-208ENST00000639561 C9J4A7 227 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms