RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 POU5F2Q8N7G0 328 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 SYT14Q8NB59 555 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 SLC30A7Q8NEW0 376 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 OR1J2Q8NGS2 313 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 FGFBP3Q8TAT2 258 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 ZNF347Q96SE7 839 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 SH3GL3Q99963 347 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 LRMDAQ9H2I8 198 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 SMURF2Q9HAU4 748 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 CMTM6Q9NX76 183 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
PTPRVP-204ENST00000639439 LOC100289279A0A1B0GTE1 492 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 IFNW1P05000 195 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 IGFBP1P08833 259 aaPredicted RBP13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 COX4I1P13073 169 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 MDH1P40925 334 aaKnown RBP13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 CHN2P52757 468 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 SELENOVP59797 346 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 RUNX1T1Q06455 604 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 MSMPQ1L6U9 139 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 ALG10Q5BKT4 473 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 ARMC4Q5T2S8 1044 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 SLC15A3Q8IY34 581 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 MOSPD2Q8NHP6 518 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 SPATA3Q8NHX4 192 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 FNDC8Q8TC99 324 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 GEMIN6Q8WXD5 167 aaKnown RBP13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 MSI2Q96DH6 328 aaKnown RBP13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 BPIFA2Q96DR5 249 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 SHARPINQ9H0F6 387 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 KCNN2Q9H2S1 579 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 TXNIPQ9H3M7 391 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 EFCAB1Q9HAE3 211 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 SIAEQ9HAT2 523 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 GPR160Q9UJ42 338 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 ZNF346Q9UL40 294 aaKnown RBP13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 A4GNTQ9UNA3 340 aa13.38□□□□□ -0.27
PTPRVP-204ENST00000639439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.38□□□□□ -0.275e-8■■□□□ 11.7
PTPRVP-204ENST00000639439 IQCMA0A1B0GVH7 501 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 GSTA4O15217 222 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 SNAP29O95721 258 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 TACSTD2P09758 323 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 IFI30P13284 250 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 MRPS34P82930 218 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 MYBPC1Q00872 1141 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 LIPEQ05469 1076 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 TRAM2Q15035 370 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 TBC1D28Q2M2D7 210 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 RBM15BQ8NDT2 890 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 HPS1Q92902 700 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 SYT3Q9BQG1 590 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 ALG12Q9BV10 488 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 TPK1Q9H3S4 243 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 DUSP13Q9UII6 198 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 MXRA5Q9NR99 2828 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 MALRD1Q5VYJ5 2156 aa13.37□□□□□ -0.27
PTPRVP-204ENST00000639439 A0A1W2PPW3 197 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 CXCR6O00574 342 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 HNF1AP20823 631 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 RAD52P43351 418 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 SLC7A2P52569 658 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 HSF2Q03933 536 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 CD47Q08722 323 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 RIN1Q13671 783 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 IFI44LQ53G44 452 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 HACD2Q6Y1H2 254 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 CBLL1Q75N03 491 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 VTCN1Q7Z7D3 282 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 RNF113BQ8IZP6 322 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 NMD3Q96D46 503 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 RBP7Q96R05 134 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 BCL2L14Q9BZR8 327 aa13.36□□□□□ -0.27
PTPRVP-204ENST00000639439 STAB1Q9NY15 2570 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 FBN1P35555 2871 aaKnown RBP13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 PIP5K1CO60331 668 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 LILRA1O75019 489 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 ZNF682O95780 498 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 TGFAP01135 160 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 IGHMP01871 453 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 SAGP10523 405 aaPredicted RBP13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 IGFBP5P24593 272 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 APLNRP35414 380 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 THBS2P35442 1172 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 ALDH3B1P43353 468 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 SLC9A3P48764 834 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 RPL27P61353 136 aaKnown RBP13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 MRPS11P82912 194 aaKnown RBP13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 MOGQ16653 247 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 THEM4Q5T1C6 240 aa13.35□□□□□ -0.27
PTPRVP-204ENST00000639439 C8orf82Q6P1X6 216 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms