RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 H2AFJQ9BTM1 129 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR2J1Q9GZK6 312 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 NRSN2Q9GZP1 204 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TM7SF3Q9NS93 570 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CARHSP1Q9Y2V2 147 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 AMDHD2Q9Y303 409 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 KDM6BO15054 1643 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 FREM1Q5H8C1 2179 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PRSS51A0A1B0GVH4 220 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PRORSD1PA6NEY8 169 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 HIDE1A8MVS5 230 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 M0R2Z0 102 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PRICKLE3O43900 615 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 FZD7O75084 574 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 FARS2O95363 451 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 NPBWR2P48146 333 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RFX2P48378 723 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RIPPLY3P57055 190 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 GDF6Q6KF10 455 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CENPVQ7Z7K6 275 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 LAX1Q8IWV1 398 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR8I2Q8N0Y5 310 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RNASEH2CQ8TDP1 164 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 AP1S3Q96PC3 154 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CIB3Q96Q77 187 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 MEGF9Q9H1U4 602 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 BEX1Q9HBH7 125 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ASB6Q9NWX5 421 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR10H1Q9Y4A9 318 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 DENND4BO75064 1496 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RBFOX2O43251 390 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CTSVO60911 334 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 HBA1P69905 142 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RPL24P83731 157 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SCAPQ12770 1279 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CST9Q5W186 159 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF621Q6ZSS3 439 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SLC47A2Q86VL8 602 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TEX26Q8N6G2 289 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RDH11Q8TC12 318 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SLC39A8Q9C0K1 460 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 FBXO4Q9UKT5 387 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 DAPP1Q9UN19 280 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PIGLQ9Y2B2 252 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 B3GALT1Q9Y5Z6 326 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 DOPEY2Q9Y3R5 2298 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 LAMTOR5O43504 91 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 PNLIPRP1P54315 467 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 MESP2Q0VG99 397 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 MRPL23Q16540 153 aaKnown RBP3.94□□□□□ -1.78
SCN3A-209ENST00000639244 OR10K2Q6IF99 312 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 LGI3Q8N145 548 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 PYCR2Q96C36 320 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 RAB39BQ96DA2 213 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 PHYHIPLQ96FC7 376 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 NEDD4LQ96PU5 975 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 RSPO3Q9BXY4 272 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-209ENST00000639244 TEX101Q9BY14 249 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 APMAPQ9HDC9 416 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 RAB22AQ9UL26 194 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 STYXL1Q9Y6J8 313 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 MUC4Q99102 2169 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 TANC2Q9HCD6 1990 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 ABCA3Q99758 1704 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 LOC100509620A0A075B734 347 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 A0A1W2PP18 115 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 DHRS12A0PJE2 317 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 PCNX2A6NKB5 2137 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 YJEFN3A6XGL0 299 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 E5RGE8 158 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 FFAR3O14843 346 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 GPR42O15529 346 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 OR13C7P0DN81 318 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 CD79AP11912 226 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 CPOXP36551 454 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SLC6A11P48066 632 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 RAG2P55895 527 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 RPS16P62249 146 aaKnown RBP3.94□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM176BQ3YBM2 270 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-209ENST00000639244 GGNBP1Q5YKI7 109 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM225Q6GV28 225 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 ALKAL2Q6UX46 152 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SLC34A3Q8N130 599 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 OR13C6PQ8NH95 151 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF300Q96RE9 604 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SMIM3Q9BZL3 60 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 OR51E2Q9H255 320 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 HHATLQ9HCP6 504 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 PLA2G3Q9NZ20 509 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SDR42E2A6NKP2 422 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 BTNL10A8MVZ5 291 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SLC19A2O60779 497 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 OR2J3O76001 311 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SIX3O95343 332 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-209ENST00000639244 ETHE1O95571 254 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 SEMA4FO95754 770 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 CA3P07451 260 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 FCER1AP12319 257 aa3.94□□□□□ -1.78
SCN3A-209ENST00000639244 GZMHP20718 246 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms