RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CCDC71Q8IV32 467 aaPredicted RBP17■□□□□ 0.31
SCARB2-213ENST00000638680 CSAG2Q9Y5P2 127 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 A0A087WUU8 490 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 HSD17B6O14756 317 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 HLA-DOBP13765 273 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 ZNF385BQ569K4 471 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 AAED1Q7RTV5 226 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 TMX2-CTNND1H3BSU7 103 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 GABRB1P18505 474 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 DUSP5Q16690 384 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 KLHDC8BQ8IXV7 354 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 OPALINQ96PE5 141 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 CDCA3Q99618 268 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 IKZF5Q9H5V7 419 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 AKR7A2O43488 359 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 PRAMEF4O60810 478 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 SOD1P00441 154 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 RAB39BQ96DA2 213 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 NIT2Q9NQR4 276 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 TAS2R4Q9NYW5 299 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 ZFP92A6NM28 416 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 TSFMP43897 325 aaKnown RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 KIAA0141Q14154 515 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 AARDQ4LEZ3 155 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 PPP1R3BQ86XI6 285 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 BAGE3Q86Y29 109 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 BAGE2Q86Y30 109 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 HINT3Q9NQE9 182 aaKnown RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 NUP98P52948 1817 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 MGST1P10620 155 aaKnown RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 CD38P28907 300 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 TNFRSF4P43489 277 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 TAS2R5Q9NYW4 299 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 GAB2Q9UQC2 676 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 COA3Q9Y2R0 106 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 TMEM221A6NGB7 291 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 SCAF4O95104 1147 aaKnown RBP16.99■□□□□ 0.31
SCARB2-213ENST00000638680 ECI1P42126 302 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 ADAM5Q6NVV9 412 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 SSX9Q7RTT3 188 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 SPNS2Q8IVW8 549 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 ANKLE1Q8NAG6 615 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 BANF2Q9H503 90 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 FLVCR2Q9UPI3 526 aa16.99■□□□□ 0.31
SCARB2-213ENST00000638680 A0A087WZY1 265 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 CLN5O75503 358 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 SPNP16150 400 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 ARRB2P32121 409 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 MAP2K6P52564 334 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 FABP5Q01469 135 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 TIGD3Q6B0B8 471 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 FAAP20Q6NZ36 180 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 ADAM10O14672 748 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 CLDN20P56880 219 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 OR10A3P58181 314 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 C17orf67Q0P5P2 114 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 TOR2AQ5JU69 321 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 TMEM31Q5JXX7 168 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 SH2D5Q6ZV89 423 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 PDXPQ96GD0 296 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 SLC46A1Q96NT5 459 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 PIGLQ9Y2B2 252 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 STMND1H3BQB6 276 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 RPA2P15927 270 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 THBS3P49746 956 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 OR2G3Q8NGZ4 309 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 OR4A16Q8NH70 328 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 STACQ99469 402 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 HDAC8Q9BY41 377 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 ADAM19Q9H013 955 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 KPTNQ9Y664 436 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 H3BNC9 293 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 UBE2MP61081 183 aaKnown RBP16.98■□□□□ 0.31
SCARB2-213ENST00000638680 LIPNQ5VXI9 398 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 CLEC1AQ8NC01 280 aa16.98■□□□□ 0.31
SCARB2-213ENST00000638680 ZNF629Q9UEG4 869 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-213ENST00000638680 ACVR1Q04771 509 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 TRMT12Q53H54 448 aaKnown RBP16.97■□□□□ 0.31
SCARB2-213ENST00000638680 ADIPOR2Q86V24 386 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 NAXDQ8IW45 347 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 PTDSS2Q9BVG9 487 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 HRASLSQ9HDD0 168 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 FBXL4Q9UKA2 621 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 SCRG1O75711 98 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 SPI1P17947 270 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 TEKQ02763 1124 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 ZNF620Q6ZNG0 422 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 RTL10Q7L3V2 364 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 OR13C5Q8NGS8 318 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 SFT2D1Q8WV19 159 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 FAM234AQ9H0X4 552 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 CHD4Q14839 1912 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 LPAL2Q16609 132 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 WDR88Q6ZMY6 472 aa16.97■□□□□ 0.31
SCARB2-213ENST00000638680 TMEM182Q6ZP80 229 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-213ENST00000638680 HIST2H3AQ71DI3 136 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms