RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KLHL21Q9UJP4 597 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 IGKV1D-43A0A0B4J1Z2 117 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 RIIAD1A6NNX1 92 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 ZAR1LA6NP61 321 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 ZNF99A8MXY4 864 aaPredicted RBP14.05□□□□□ -0.16
CLN6-216ENST00000636876 RENP00797 406 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 IFNGP01579 166 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 HMGN1P05114 100 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 IGFBP2P18065 325 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 POLR2IP36954 125 aaKnown RBP14.05□□□□□ -0.16
CLN6-216ENST00000636876 GABRA6Q16445 453 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 LURAP1LQ8IV03 231 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 PACRGLQ8N7B6 248 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 SLC37A3Q8NCC5 494 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 NPEPL1Q8NDH3 523 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 OR1K1Q8NGR3 316 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 PSMG3-AS1Q96PY0 264 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 DDOQ99489 341 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 TEX12Q9BXU0 123 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 SYT4Q9H2B2 425 aa14.05□□□□□ -0.16
CLN6-216ENST00000636876 OR6C68A6NDL8 312 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 RAD51DO75771 328 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 ATP6V1G2O95670 118 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 CTLA4P16410 223 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 ZNF84P51523 738 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 CRMP1Q14194 572 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 ZIK1Q3SY52 487 aaPredicted RBP14.04□□□□□ -0.16
CLN6-216ENST00000636876 SLX4IPQ5VYV7 408 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 OR7E24Q6IFN5 339 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 ANKRD16Q6P6B7 361 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 ZNF627Q7L945 461 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 GALNT4Q8N4A0 578 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 CYB561A3Q8NBI2 242 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 ACBD4Q8NC06 268 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 NSMAFQ92636 917 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 BCL2L2Q92843 193 aaPredicted RBP14.04□□□□□ -0.16
CLN6-216ENST00000636876 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 BOD1Q96IK1 185 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 MUS81Q96NY9 551 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 FOXB1Q99853 325 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 USB1Q9BQ65 265 aaKnown RBP14.04□□□□□ -0.16
CLN6-216ENST00000636876 ACTR6Q9GZN1 396 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 NUAK2Q9H093 628 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 TOR3AQ9H497 397 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 UGT2A1Q9Y4X1 527 aa14.04□□□□□ -0.16
CLN6-216ENST00000636876 PRR14LQ5THK1 2151 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 OR5H1A6NKK0 313 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 SURF4O15260 269 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 SLC16A7O60669 478 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 KHDRBS3O75525 346 aaKnown RBP14.03□□□□□ -0.16
CLN6-216ENST00000636876 SEC14L2O76054 403 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 SNAP29O95721 258 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 PPP3CBP16298 524 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 ZNF3P17036 446 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 PEX19P40855 299 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 SNTB1Q13884 538 aaKnown RBP14.03□□□□□ -0.16
CLN6-216ENST00000636876 C12orf73Q69YU5 71 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 HIST2H2BCQ6DN03 193 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 ZNF813Q6ZN06 617 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 DMRTC2Q8IXT2 367 aaPredicted RBP14.03□□□□□ -0.16
CLN6-216ENST00000636876 C17orf78Q8N4C9 275 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 RDH12Q96NR8 316 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 SLC38A2Q96QD8 506 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 MBOAT4Q96T53 435 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 NELFAQ9H3P2 528 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 FN3KQ9H479 309 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 RPRD1BQ9NQG5 326 aaKnown RBP14.03□□□□□ -0.16
CLN6-216ENST00000636876 SLC17A5Q9NRA2 495 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 TMEM38BQ9NVV0 291 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 TVP23BQ9NYZ1 205 aa14.03□□□□□ -0.16
CLN6-216ENST00000636876 MYO9AB2RTY4 2548 aa14.02□□□□□ -0.16
CLN6-216ENST00000636876 PKDREJQ9NTG1 2253 aa14.02□□□□□ -0.16
CLN6-216ENST00000636876 IGLV1-36A0A0B4J1U3 117 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 E9PQ18 207 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 DCTN6O00399 190 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 DLGAP1O14490 977 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 B4GALT1P15291 398 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 CRABP1P29762 137 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 MRPS34P82930 218 aaKnown RBP14.02□□□□□ -0.17
CLN6-216ENST00000636876 ETFDHQ16134 617 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 SNAPC1Q16533 368 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 TBRG1Q3YBR2 411 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 HIKESHIQ53FT3 197 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 TIMM23BQ5SRD1 257 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 DNM1P34Q6PK57 102 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 MEX3BQ6ZN04 569 aaKnown RBP14.02□□□□□ -0.17
CLN6-216ENST00000636876 FOXL2NBQ6ZUU3 175 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 P2RY8Q86VZ1 359 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 NRG4Q8WWG1 115 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 PLEKHA8Q96JA3 519 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 TSSK2Q96PF2 358 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 MED18Q9BUE0 208 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 PRRG3Q9BZD7 231 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 NMNAT2Q9BZQ4 307 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 GRIP2Q9C0E4 1043 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 RERGLQ9H628 205 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 SRA1Q9HD15 236 aaKnown RBP14.02□□□□□ -0.17
CLN6-216ENST00000636876 SMPD3Q9NY59 655 aaPredicted RBP14.02□□□□□ -0.17
CLN6-216ENST00000636876 NDRG3Q9UGV2 375 aa14.02□□□□□ -0.17
CLN6-216ENST00000636876 FKBP7Q9Y680 259 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms