RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 ALDH3B1P43353 468 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 NUDT2P50583 147 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 PLP2Q04941 152 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 CD47Q08722 323 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 LAPTM4AQ15012 233 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 FXNQ16595 210 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 NRN1LQ496H8 165 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 IFI44LQ53G44 452 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 ALG10Q5BKT4 473 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 ARMC4Q5T2S8 1044 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 FAM166AQ6J272 317 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 PODNL1Q6PEZ8 512 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 LRRC18Q8N456 261 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 RBM15BQ8NDT2 890 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 GEMIN6Q8WXD5 167 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 SEPHS2Q99611 448 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 HOPXQ9BPY8 73 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 BEX2Q9BXY8 128 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 SHARPINQ9H0F6 387 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 MS4A5Q9H3V2 200 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 EFCAB1Q9HAE3 211 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 TMEM160Q9NX00 188 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 RHCGQ9UBD6 479 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 KCNS2Q9ULS6 477 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 HIF3AQ9Y2N7 669 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 IQCMA0A1B0GVH7 501 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC22A23A1A5C7 686 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 NPIPB13A6NJU9 1138 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 NPIPB4C9JG80 1138 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 J3KTA2 159 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 NME4O00746 187 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 LMX1BO60663 402 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 PTHP01270 115 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 TSPAN19P0C672 248 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 FAM157BP0CG42 384 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 CCL2P13500 99 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF23P17027 643 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 TCN1P20061 433 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 HSF2Q03933 536 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 MAD2L1BPQ15013 274 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 TRAM2Q15035 370 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 TAF11Q15544 211 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 TBC1D28Q2M2D7 210 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 C10orf128Q5T292 105 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 RGS7BPQ6MZT1 257 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 FKBP9P1Q75LS8 142 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 LRP11Q86VZ4 500 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 NRMQ8IXM6 262 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF786Q8N393 782 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 NSMAFQ92636 917 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 FAM162AQ96A26 154 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 HSH2DQ96JZ2 352 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 LRMDAQ9H2I8 198 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 OR51B6Q9H340 312 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 TXNIPQ9H3M7 391 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 CHODLQ9H9P2 273 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 SMURF2Q9HAU4 748 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 CCNB1IP1Q9NPC3 277 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 LPAR3Q9UBY5 353 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 DUSP13Q9UII6 198 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 SNX13Q9Y5W8 968 aa12.91□□□□□ -0.34
CACNA1A-230ENST00000636768 ARFGEF3Q5TH69 2177 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 NDUFAB1O14561 156 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MGRN1O60291 552 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 SERPINA1P01009 418 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 LCKP06239 509 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 IGFBP1P08833 259 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 FAM157CP0CG43 387 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MAKP20794 623 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 GIFP27352 417 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 CDAP32320 146 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 GSK3BP49841 420 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 CHN2P52757 468 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 SELENOVP59797 346 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 RPL27P61353 136 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MRPS34P82930 218 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 FMODQ06828 376 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF730Q6ZMV8 503 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 CBLL1Q75N03 491 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 IGFN1Q86VF2 1251 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MEX3DQ86XN8 651 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 TREML1Q86YW5 311 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 PAQR4Q8N4S7 273 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 ICA1LQ8NDH6 482 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 OR1J2Q8NGS2 313 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MSI2Q96DH6 328 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 KCTD14Q9BQ13 255 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 SIAEQ9HAT2 523 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MAN2C1Q9NTJ4 1040 aa12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 MYEF2Q9P2K5 600 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF346Q9UL40 294 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-230ENST00000636768 TRAV27A0A087WT01 109 aa12.89□□□□□ -0.35
CACNA1A-230ENST00000636768 LRP5LA4QPB2 252 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms