RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
SSBP4-215ENST00000625926 MRPL37Q9BZE1 423 aaKnown RBP9.34□□□□□ -0.91
SSBP4-215ENST00000625926 KCNN2Q9H2S1 579 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 TXNIPQ9H3M7 391 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 C1orf198Q9H425 327 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 SIAEQ9HAT2 523 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 SMURF2Q9HAU4 748 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 RHCGQ9UBD6 479 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 REV1Q9UBZ9 1251 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 SLC7A8Q9UHI5 535 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 HIF3AQ9Y2N7 669 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 SNX13Q9Y5W8 968 aa9.34□□□□□ -0.91
SSBP4-215ENST00000625926 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 ARID1AO14497 2285 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 IQCMA0A1B0GVH7 501 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 GMNCA6NCL1 334 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 J3KTA2 159 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 M0R233 179 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 FFAR1O14842 300 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 SERPINA1P01009 418 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 IGHV4-31P0DP07 118 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 SAGP10523 405 aaPredicted RBP9.33□□□□□ -0.92
SSBP4-215ENST00000625926 APEHP13798 732 aaKnown RBP9.33□□□□□ -0.92
SSBP4-215ENST00000625926 MAKP20794 623 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 NUDT2P50583 147 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 SEC24CP53992 1094 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 PSME3P61289 254 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 MRPS34P82930 218 aaKnown RBP9.33□□□□□ -0.92
SSBP4-215ENST00000625926 PRKCDQ05655 676 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 MSMPQ1L6U9 139 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 ANKDD1AQ495B1 522 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 NRMQ8IXM6 262 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 ZNF786Q8N393 782 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 LRRC18Q8N456 261 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 OR1J2Q8NGS2 313 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 OR51A7Q8NH64 312 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 FNDC8Q8TC99 324 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 UBASH3BQ8TF42 649 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 HDAC2Q92769 488 aaKnown RBP9.33□□□□□ -0.92
SSBP4-215ENST00000625926 FAM162AQ96A26 154 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 HSH2DQ96JZ2 352 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 RBP7Q96R05 134 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 KCTD14Q9BQ13 255 aaPredicted RBP9.33□□□□□ -0.92
SSBP4-215ENST00000625926 SYT3Q9BQG1 590 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 BPESC1Q9GZL8 116 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 MYLK2Q9H1R3 596 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 LRMDAQ9H2I8 198 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 CDH20Q9HBT6 801 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 DUSP13Q9UII6 198 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 ZNF346Q9UL40 294 aaKnown RBP9.33□□□□□ -0.92
SSBP4-215ENST00000625926 PRR14LQ5THK1 2151 aa9.33□□□□□ -0.92
SSBP4-215ENST00000625926 STAB1Q9NY15 2570 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 A0A087WUU8 490 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 IGHV4-61A0A0C4DH41 118 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 EFCAB9A8MZ26 197 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 SLC2A10O95528 541 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 SNAP29O95721 258 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 IFNA2P01563 188 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 IGFBP1P08833 259 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 CCL2P13500 99 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 ZNF23P17027 643 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 FUT4P22083 530 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 GIFP27352 417 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 PRDX6P30041 224 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 GUCA1AP43080 201 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 RAD52P43351 418 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 SLC9A3P48764 834 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 SELENOVP59797 346 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 CTXN1P60606 82 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 RPL27P61353 136 aaKnown RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 CD47Q08722 323 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 TOP3AQ13472 1001 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 SGCAQ16586 387 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 TBC1D28Q2M2D7 210 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 THEM4Q5T1C6 240 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 FAM205BPQ63HN1 556 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 RGS7BPQ6MZT1 257 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 ZNF730Q6ZMV8 503 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 MBOAT2Q6ZWT7 520 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 RRM2BQ7LG56 351 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 OAFQ86UD1 273 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 LRP11Q86VZ4 500 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 CYP4Z1Q86W10 505 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 LRRC75AQ8NAA5 344 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 RBM15BQ8NDT2 890 aaKnown RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 ACOT11Q8WXI4 607 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 NSMAFQ92636 917 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 NMD3Q96D46 503 aaKnown RBP9.32□□□□□ -0.92
SSBP4-215ENST00000625926 ALG12Q9BV10 488 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 BEX2Q9BXY8 128 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 FAM107BQ9H098 131 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 TPK1Q9H3S4 243 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 CCNB1IP1Q9NPC3 277 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 MAN2C1Q9NTJ4 1040 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 ABCD2Q9UBJ2 740 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 RPS6KA6Q9UK32 745 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 CDC42EP3Q9UKI2 254 aa9.32□□□□□ -0.92
SSBP4-215ENST00000625926 FZR1Q9UM11 496 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms