RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CD300LGQ6UXG3 332 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 ELMOD3Q96FG2 381 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CNTNAP3BQ96NU0 1288 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 PCED1AQ9H1Q7 454 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 LUZP4Q9P127 313 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 A6NHS1 94 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 NOTOA8MTQ0 251 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF728P0DKX0 622 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 BAXQ07812 192 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 LPCAT3Q6P1A2 487 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 GALNT9Q9HCQ5 603 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 POMT2Q9UKY4 750 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 PPT2Q9UMR5 302 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
CLIP1-219ENST00000620786 APOA2P02652 100 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CLEC3BP05452 202 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 FAM157BP0CG42 384 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A6P0DMU7 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A5P0DMU8 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A7P0DMV0 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A8P0DMV1 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A9P0DMV2 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 TBXA2RP21731 343 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 NFYAP23511 347 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-219ENST00000620786 GSK3AP49840 483 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 IHHQ14623 411 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A2Q5DJT8 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A1Q5HYN5 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 WDR5BQ86VZ2 330 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 DND1Q8IYX4 353 aaKnown RBP10.42□□□□□ -0.74
CLIP1-219ENST00000620786 SLC35G3Q8N808 338 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 OR5M9Q8NGP3 310 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 OR14K1Q8NGZ2 314 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CT45A3Q8NHU0 189 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 ARL11Q969Q4 196 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 SDF2Q99470 211 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 RCE1Q9Y256 329 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF195O14628 629 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 MSTNO14793 375 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 APOC3P02656 99 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CHATP28329 748 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CTGFP29279 349 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 TRIM23P36406 574 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 TBCEQ15813 527 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-219ENST00000620786 Q96M85 177 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 C1orf123Q9NWV4 160 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 KIF25Q9UIL4 384 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 AGPAT2O15120 278 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 CR2P20023 1033 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 OPRL1P41146 370 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 ZNF133P52736 654 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-219ENST00000620786 GALEQ14376 348 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 OR1C1Q15619 314 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 KCNJ8Q15842 424 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 PIWIL3Q7Z3Z3 882 aaKnown RBP10.42□□□□□ -0.74
CLIP1-219ENST00000620786 RETREG3Q86VR2 466 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 LGALS14Q8TCE9 139 aa10.42□□□□□ -0.74
CLIP1-219ENST00000620786 IGHV3-64DA0A0J9YX35 117 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 LILRA5A6NI73 299 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 IL1AP01583 271 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 IGLV3-25P01717 112 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 TPT1P13693 172 aaKnown RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 RAB4AP20338 218 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 GLIPR1L1Q6UWM5 242 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 DOK3Q7L591 496 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 OVCH1Q7RTY7 1134 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 DTWD2Q8NBA8 298 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 OR10X1Q8NGY0 326 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 FRZBQ92765 325 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 SUCNR1Q9BXA5 334 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 SLC17A4Q9Y2C5 497 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 NTNG1Q9Y2I2 539 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 LAMB1P07942 1786 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 PRICKLE3O43900 615 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 PRKNO60260 465 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 MED6O75586 246 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 NXPH3O95157 252 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 CLDN1O95832 211 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 GUSBP08236 651 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 RPA2P15927 270 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 ILKQ13418 452 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 TRIP6Q15654 476 aaKnown RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 DEFB108BQ8NET1 73 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 C16orf52Q8NHV5 167 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 NECAP2Q9NVZ3 263 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 PTTG3PQ9NZH4 202 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 DOCK2Q92608 1830 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 HMGN4O00479 90 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 NAGAP17050 411 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 YIF1BQ5BJH7 314 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 OTUD1Q5VV17 481 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 TCTN3Q6NUS6 607 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 BCDIN3DQ7Z5W3 292 aaKnown RBP10.41□□□□□ -0.74
CLIP1-219ENST00000620786 GAB3Q8WWW8 586 aa10.41□□□□□ -0.74
CLIP1-219ENST00000620786 CPNE4Q96A23 557 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms