RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 BCDIN3DQ7Z5W3 292 aaKnown RBP11.98□□□□□ -0.49
NEK3-210ENST00000620675 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 DNAJC9Q8WXX5 260 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 RNASE6Q93091 150 aaKnown RBP11.98□□□□□ -0.49
NEK3-210ENST00000620675 NUAK2Q9H093 628 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 SLC25A19Q9HC21 320 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 RPRD1BQ9NQG5 326 aaKnown RBP11.98□□□□□ -0.49
NEK3-210ENST00000620675 UGT2A1Q9Y4X1 527 aa11.98□□□□□ -0.49
NEK3-210ENST00000620675 ZNF503-AS2A6NEH8 195 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 A6NIZ1 184 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 E9PQ18 207 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 XKRYO14609 159 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 SURF4O15260 269 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 UGT2B10P36537 528 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 RAP1BP61224 184 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 RAP1AP62834 184 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 ITGADQ13349 1161 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 LYPD4Q6UWN0 246 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 OR6V1Q8N148 313 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 S100PBPQ96BU1 408 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 GRIP2Q9C0E4 1043 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 TVP23BQ9NYZ1 205 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 VSX1Q9NZR4 365 aaPredicted RBP11.97□□□□□ -0.49
NEK3-210ENST00000620675 AASSQ9UDR5 926 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 ITPR2Q14571 2701 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 SPG11Q96JI7 2443 aa11.97□□□□□ -0.49
NEK3-210ENST00000620675 RPL36A-HNRNPH2H7BZ11 118 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 DHHO43323 396 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 PRKYO43930 277 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 SLC16A7O60669 478 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 B4GALT1P15291 398 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 MPGP29372 298 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 TUBA1BP68363 451 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 TUBA4AP68366 448 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 GABRA6Q16445 453 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 SLX4IPQ5VYV7 408 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 TUBA1AQ71U36 451 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 JAZF1Q86VZ6 243 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 BBS1Q8NFJ9 593 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 LINC01560Q8TB33 94 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 ALG12Q9BV10 488 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 NDEL1Q9GZM8 345 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 SRA1Q9HD15 236 aaKnown RBP11.96□□□□□ -0.49
NEK3-210ENST00000620675 CMC2Q9NRP2 79 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 TAS2R16Q9NYV7 291 aa11.96□□□□□ -0.49
NEK3-210ENST00000620675 IDH3BO43837 385 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 MPZL1O95297 269 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.5
NEK3-210ENST00000620675 CLIC3O95833 236 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 PSMB1P20618 241 aaKnown RBP11.96□□□□□ -0.5
NEK3-210ENST00000620675 PYCR1P32322 319 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 GRK5P34947 590 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 ZNF133P52736 654 aaPredicted RBP11.96□□□□□ -0.5
NEK3-210ENST00000620675 FAM205BPQ63HN1 556 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.5
NEK3-210ENST00000620675 ADCK1Q86TW2 530 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 OR1K1Q8NGR3 316 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 FGFBP3Q8TAT2 258 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 PTP4A1Q93096 173 aa11.96□□□□□ -0.5
NEK3-210ENST00000620675 KISS1RQ969F8 398 aaPredicted RBP11.96□□□□□ -0.5
NEK3-210ENST00000620675 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.5
NEK3-210ENST00000620675 POLQO75417 2590 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 CACNA1DQ01668 2161 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ZNF99A8MXY4 864 aaPredicted RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 PRSS44E7EML9 344 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 PATE4P0C8F1 98 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 PTDSS1P48651 473 aaKnown RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 P2RY6Q15077 328 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 STK11Q15831 433 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 C10orf128Q5T292 105 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 C12orf73Q69YU5 71 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ALKBH2Q6NS38 261 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 B3GLCTQ6Y288 498 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 HDDC2Q7Z4H3 204 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 OTULINQ96BN8 352 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ZC3HAV1LQ96H79 300 aaKnown RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 WFIKKN1Q96NZ8 548 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 IL4I1Q96RQ9 567 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ACTR6Q9GZN1 396 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ZNF224Q9NZL3 707 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 COA3Q9Y2R0 106 aaPredicted RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 CSMD2Q7Z408 3487 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 ASH1LQ9NR48 2969 aaKnown RBP11.95□□□□□ -0.5
NEK3-210ENST00000620675 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 IGLV1-36A0A0B4J1U3 117 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 CIB4A0PJX0 185 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 C16orf97H3BN30 126 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 THBDP07204 575 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 IGFBP2P18065 325 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 RAD23AP54725 363 aa11.95□□□□□ -0.5
NEK3-210ENST00000620675 AQP4P55087 323 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms