RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ABCD4O14678 606 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 CIB2O75838 187 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 SOX14O95416 240 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 TXNDC12O95881 172 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 IGKV3-15P01624 115 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 IGLV1-44P01699 117 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 SCG5P05408 212 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 HOXC12P31275 282 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 SLC6A6P31641 620 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 NR1H2P55055 460 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 UBE2NP61088 152 aaKnown RBP9.4□□□□□ -0.9
TARDBP-223ENST00000620632 RAP1BP61224 184 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 RAP1AP62834 184 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 CLEC12AQ5QGZ9 265 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 FAM205BPQ63HN1 556 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 KLHL17Q6TDP4 642 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 B3GLCTQ6Y288 498 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 RASSF6Q6ZTQ3 369 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 HDDC2Q7Z4H3 204 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 MDP1Q86V88 176 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 SLC22A24Q8N4F4 322 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 LINC00471Q8N535 108 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 OR4Q3Q8NH05 313 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 GIPC3Q8TF64 312 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 PYDC1Q8WXC3 89 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 LRTOMTQ8WZ04 291 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 FOXN4Q96NZ1 517 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 ERMAPQ96PL5 475 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-223ENST00000620632 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
TARDBP-223ENST00000620632 UBTD1Q9HAC8 227 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 OBP2BQ9NPH6 170 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 ARMC1Q9NVT9 282 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 IL20Q9NYY1 176 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 PDP1Q9P0J1 537 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-223ENST00000620632 STX18Q9P2W9 335 aaKnown RBP9.4□□□□□ -0.9
TARDBP-223ENST00000620632 REV1Q9UBZ9 1251 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 MGAT4BQ9UQ53 548 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 RNF115Q9Y4L5 304 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 CDH10Q9Y6N8 788 aa9.4□□□□□ -0.9
TARDBP-223ENST00000620632 H3BNX3 289 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 DCTN6O00399 190 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ARPC3O15145 178 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 WNT11O96014 354 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 CD3EP07766 207 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 CECR9P0C854 216 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 APEHP13798 732 aaKnown RBP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 HIST1H1CP16403 213 aaKnown RBP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 CTLA4P16410 223 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 HOXB6P17509 224 aaKnown RBP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 CALCRP30988 508 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 CAPZA2P47755 286 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 RPS6KA3P51812 740 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ACTR3P61158 418 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 PIGFQ07326 219 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 GK3PQ14409 553 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ATP6AP1Q15904 470 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF362Q5T0B9 420 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 THEM4Q5T1C6 240 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 OTPQ5XKR4 325 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 GPR139Q6DWJ6 353 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 PAMR1Q6UXH9 720 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 FOXL2NBQ6ZUU3 175 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 AMIGO2Q86SJ2 522 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 CDH24Q86UP0 819 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 AKAP1Q92667 903 aaKnown RBP eCLIP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 TSSK2Q96PF2 358 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 SLC38A2Q96QD8 506 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 IFT27Q9BW83 186 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 SYT4Q9H2B2 425 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 FN3KQ9H479 309 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 DENND2DQ9H6A0 471 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 YY1AP1Q9H869 796 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 SMURF2Q9HAU4 748 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 NGBQ9NPG2 151 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 VSX1Q9NZR4 365 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ST6GALNAC2Q9UJ37 374 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 PLEKHA6Q9Y2H5 1048 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ARFGEF3Q5TH69 2177 aa9.39□□□□□ -0.91
TARDBP-223ENST00000620632 ATP6V1G2-DDX39BF2Z307 99 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 XKRYO14609 159 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 DEAF1O75398 565 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 E2F6O75461 281 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 ATE1O95260 518 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 GPANK1O95872 356 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 OR8G3PP0DMU2 310 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 CD79AP11912 226 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 CBR1P16152 277 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF14P17017 642 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 CD53P19397 219 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 PTAFRP25105 342 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF84P51523 738 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 IDH3GP51553 393 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 MRPS34P82930 218 aaKnown RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 NPRL3Q12980 569 aa9.38□□□□□ -0.91
TARDBP-223ENST00000620632 ZNF672Q499Z4 452 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-223ENST00000620632 SLC35F1Q5T1Q4 408 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms