RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TRAF4Q9BUZ4 470 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 MMADHCQ9H3L0 296 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 SEC61A2Q9H9S3 476 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 VNN3Q9NY84 501 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 CISD1Q9NZ45 108 aaKnown RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 VSX1Q9NZR4 365 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 SLC7A8Q9UHI5 535 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 POFUT2Q9Y2G5 429 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 ADAM18Q9Y3Q7 739 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 FLNAP21333 2647 aaKnown RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 SLC22A23A1A5C7 686 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ARRDC5A6NEK1 342 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 UNC119BA6NIH7 251 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TNFRSF11BO00300 401 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ICMTO60725 284 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SEC14L2O76054 403 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 UBL3O95164 117 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SLC2A10O95528 541 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 HLA-HP01893 362 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TP53P04637 393 aaPredicted RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 CELA3BP08861 270 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 OR8G3PP0DMU2 310 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 NR2C1P13056 603 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ZNF35P13682 527 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 B4GALT1P15291 398 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 NPR2P20594 1047 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CALCRP30988 508 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SDHAP31040 664 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TTKP33981 857 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ACVR1BP36896 505 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 IFNGR2P38484 337 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CLRN1P58418 232 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ERVK-25P63136 954 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TUBA1BP68363 451 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TUBA4AP68366 448 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 NKX6-1P78426 367 aaPredicted RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 HGFACQ04756 655 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CHRNB3Q05901 458 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 FMODQ06828 376 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 FOXD4Q12950 439 aaPredicted RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 SWI5Q1ZZU3 235 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 MICAQ29983 383 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 GSG1Q2KHT4 349 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 MST1LQ2TV78 715 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 FAM98BQ52LJ0 330 aaKnown RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 FAM27BQ5VT28 67 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 GPR139Q6DWJ6 353 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 OR2T5Q6IEZ7 315 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ALKBH2Q6NS38 261 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SMARCD3Q6STE5 483 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CD300LDQ6UXZ3 194 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 DNM1P46Q6ZS02 220 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TUBA1AQ71U36 451 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 ASRGL1Q7L266 308 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 IGFN1Q86VF2 1251 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 LURAP1LQ8IV03 231 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CLDN22Q8N7P3 220 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SYT14Q8NB59 555 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 NUP37Q8NFH4 326 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 IL17RDQ8NFM7 739 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 OR2T29Q8NH02 315 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 FGFBP3Q8TAT2 258 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 GNPDA2Q8TDQ7 276 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CANT1Q8WVQ1 401 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SLCO4A1Q96BD0 722 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CCDC124Q96CT7 223 aaKnown RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 DUS3LQ96G46 650 aaKnown RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 Q96M85 177 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SNX18Q96RF0 628 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 DDOQ99489 341 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CCL19Q99731 98 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 WACQ9BTA9 647 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TMUB1Q9BVT8 246 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 CHID1Q9BWS9 393 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 C1QTNF6Q9BXI9 259 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 DGCR6LQ9BY27 220 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 LRMDAQ9H2I8 198 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 SIAEQ9HAT2 523 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 KRCC1Q9NPI7 259 aaPredicted RBP7.16□□□□□ -1.26
NEK3-209ENST00000618856 DLL4Q9NR61 685 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 IL20Q9NYY1 176 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 FBXL3Q9UKT7 428 aa7.16□□□□□ -1.26
NEK3-209ENST00000618856 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
NEK3-209ENST00000618856 NF1P21359 2839 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 DSCAMO60469 2012 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 F8P00451 2351 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 IGHV2OR16-5A0A0B4J2B6 119 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 DHRS12A0PJE2 317 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 PRSS37A4D1T9 235 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 ATP6V1G2-DDX39BF2Z307 99 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 OR10H3O60404 316 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 ENTPD5O75356 428 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 GASTP01350 101 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 SERPINA5P05154 406 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 SCG5P05408 212 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 APOBEC3AP31941 199 aaPredicted RBP7.15□□□□□ -1.26
NEK3-209ENST00000618856 PTH2RP49190 550 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 RASSF2P50749 326 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 ZNF84P51523 738 aa7.15□□□□□ -1.26
NEK3-209ENST00000618856 CDH11P55287 796 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms