RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 POMGNT2Q8NAT1 580 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 OR51A4Q8NGJ6 313 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 JAM3Q9BX67 310 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 CPNE5Q9HCH3 593 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 SH2D2AQ9NP31 389 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 BRD7Q9NPI1 651 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 B3GAT2Q9NPZ5 323 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 SLCO1C1Q9NYB5 712 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 GSTK1Q9Y2Q3 226 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 SMG1Q96Q15 3661 aaKnown RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 IGLV3-32A0A0A0MS00 114 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 TRDV1A0A1B0GX56 115 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ARGFXA6NJG6 315 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ACOD1A6NK06 481 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 TERTO14746 1132 aaKnown RBP6.96□□□□□ -1.29
NEK3-207ENST00000617054 NKX2-8O15522 239 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ZNHIT1O43257 154 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ZNF208O43345 1280 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 PLPP2O43688 288 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 SERPINA7P05543 415 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ICAM2P13598 275 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 APEHP13798 732 aaKnown RBP6.96□□□□□ -1.29
NEK3-207ENST00000617054 SUMO3P55854 103 aaPredicted RBP6.96□□□□□ -1.29
NEK3-207ENST00000617054 PSPHP78330 225 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ZNF846Q147U1 533 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 GPR139Q6DWJ6 353 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 CD200R1LQ6Q8B3 271 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 OR10AC1Q8NH08 325 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 OR14L1PQ8NHC6 308 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.29
NEK3-207ENST00000617054 FRMD6Q96NE9 622 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 INTS14Q96SY0 518 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 PCDHGA1Q9Y5H4 931 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 N6AMT1Q9Y5N5 214 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 NOX1Q9Y5S8 564 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 DOCK7Q96N67 2140 aa6.96□□□□□ -1.29
NEK3-207ENST00000617054 ZFPL1O95159 310 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 WDPCPO95876 746 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 PAHP00439 452 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CYC1P08574 325 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC2A2P11168 524 aaPredicted RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 SOX2P48431 317 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CD97P48960 835 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 GBX2P52951 348 aaPredicted RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC25A1P53007 311 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ACTC1P68032 377 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ACTA1P68133 377 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ACSM1Q08AH1 577 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CDONQ4KMG0 1287 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 EMC4Q5J8M3 183 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC35D3Q5M8T2 416 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 DMKNQ6E0U4 476 aaPredicted RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 GDPGP1Q6ZNW5 385 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC16A9Q7RTY1 509 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 TMPRSS7Q7RTY8 843 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC43A2Q8N370 569 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ASB10Q8WXI3 467 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CEP19Q96LK0 163 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SEC61A2Q9H9S3 476 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SMURF1Q9HCE7 757 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ISYNA1Q9NPH2 558 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CCDC59Q9P031 241 aaKnown RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 FRRS1LQ9P0K9 344 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CSAG2Q9Y5P2 127 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 IGLV1-36A0A0B4J1U3 117 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 A0A0J9YW62 118 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 FAM47E-STBD1D6RA91 191 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SNPHO15079 494 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 IGHEP01854 428 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 WT1P19544 449 aaPredicted RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 ALOX5APP20292 161 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 P2RY4P51582 365 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 DSCR4P56555 118 aaPredicted RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 RPS11P62280 158 aaKnown RBP eCLIP6.96□□□□□ -1.3
NEK3-207ENST00000617054 SRYQ05066 204 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC25A35Q3KQZ1 300 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 IDNKQ5T6J7 187 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 OR7E24Q6IFN5 339 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CDC20BQ86Y33 519 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ADAMTS17Q8TE56 1095 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ADAMTS14Q8WXS8 1223 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 CLUHP3Q96NS8 147 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 ZNF385AQ96PM9 386 aaKnown RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 NXF2Q9GZY0 626 aaKnown RBP6.96□□□□□ -1.3
NEK3-207ENST00000617054 SLC25A18Q9H1K4 315 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 FBXL3Q9UKT7 428 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 SPTBN4Q9H254 2564 aa6.96□□□□□ -1.3
NEK3-207ENST00000617054 TRABD2BA6NFA1 517 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 FAM166BA8MTA8 275 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 HPGDSO60760 199 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 CBR3O75828 277 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 NEURL1O76050 574 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 GDF1P27539 372 aa6.95□□□□□ -1.3
NEK3-207ENST00000617054 FGF9P31371 208 aaPredicted RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 SUCLG1P53597 346 aaKnown RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 EIF3IQ13347 325 aaKnown RBP6.95□□□□□ -1.3
NEK3-207ENST00000617054 CDK5R1Q15078 307 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms