RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 SHC2P98077 582 aa12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EXOSC7Q15024 291 aaKnown RBP12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GLYATL3Q5SZD4 288 aa12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 DMKNQ6E0U4 476 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CNRIP1Q96F85 164 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TMPRSS13Q9BYE2 586 aa12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MSRAQ9UJ68 235 aa12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 KNTC1P50748 2209 aa12.81□□□□□ -0.36
TNFRSF11A-205ENST00000616710 A0A087WZY1 265 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GPANK1O95872 356 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NPY4RP50391 375 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ZNF84P51523 738 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MRPS10P82664 201 aaKnown RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ACY1Q03154 408 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 JMJD6Q6NYC1 403 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 HSD17B11Q8NBQ5 300 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR51A4Q8NGJ6 313 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CMBLQ96DG6 245 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TMPRSS5Q9H3S3 457 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SEMA6CQ9H3T2 930 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 C7orf77A4D0Y5 90 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GPR89AB7ZAQ6 455 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 UMAD1C9J7I0 102 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PPP1R2P9O14990 202 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ADAP1O75689 374 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 AIFM1O95831 613 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ZGLP1P0C6A0 271 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GPR89BP0CG08 455 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GJA4P35212 333 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 FAM111BQ6SJ93 734 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 LRRC69Q6ZNQ3 347 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MOB3CQ70IA8 216 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MIB2Q96AX9 1013 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NECAB3Q96P71 396 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 AP4M1O00189 453 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RCC1P18754 421 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MAPK3P27361 379 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PSMB6P28072 239 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EIPR1Q53HC9 387 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EEF1A1P5Q5VTE0 462 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ARHGAP11AQ6P4F7 1023 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 KIRREL1Q96J84 757 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 FBXO34Q9NWN3 711 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 YIPF1Q9Y548 306 aa12.8□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR52A4PA6NMU1 304 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR2C1O95371 312 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 AHSA1O95433 338 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CD1CP29017 333 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 Q499Y3 187 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 DND1Q8IYX4 353 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CSNK1A1LQ8N752 337 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GVQW1Q8N7I0 195 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 HPSE2Q8WWQ2 592 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EDEM2Q9BV94 578 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 COL4A5P29400 1685 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 H7C417 338 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SCAF4O95104 1147 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MDKP21741 143 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GPX4P36969 197 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR2T27Q8NH04 317 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CXorf40AQ8TE69 158 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MS4A8Q9BY19 250 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR52A5Q9H2C5 316 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MTHFD2LQ9H903 347 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MRPS18AQ9NVS2 196 aaKnown RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PPP4R1LQ9P1A2 415 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MTFP1Q9UDX5 166 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TRAV8-7A0A075B6U6 113 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PIN1P1O15428 100 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GLSO94925 669 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EPPINO95925 133 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PRKAR1BP31321 381 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GPR143P51810 404 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 FKBP1BP68106 108 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 BDH1Q02338 343 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 UQCC3Q6UW78 93 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR6N1Q8NGY5 312 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 HIST1H2BAQ96A08 127 aa12.79□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ATG2BQ96BY7 2078 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TRAV1-2A0A0B4J238 106 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 A0A1W2PR48 441 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ZNF878C9JN71 531 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms