RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZNF517Q6ZMY9 492 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 EGLN2Q96KS0 407 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 DIRC2Q96SL1 478 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SF3B5Q9BWJ5 86 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 CHIAQ9BZP6 476 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 UNKLQ9H9P5 680 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 LIN7BQ9HAP6 207 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 AMMECR1Q9Y4X0 333 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 E9PI62 339 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 C17orf112F2Z3M2 114 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ENSAO43768 121 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SULT1C4O75897 302 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAB11AP62491 216 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 UBE2IP63279 158 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SRSF5Q13243 272 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SMIM21Q3B7S5 101 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 CCDC58Q4VC31 144 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 FHL5Q5TD97 284 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF554Q86TJ5 538 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SYNPRQ8TBG9 265 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 RIMS4Q9H426 269 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 BCO1Q9HAY6 547 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 LOC100509620A0A075B734 347 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 AGAP5A6NIR3 686 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 FAM90A27PA6NNH2 459 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF736B4DX44 427 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 PEX11BO96011 259 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 KLRB1Q12918 225 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TIGD3Q6B0B8 471 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 BHLHA9Q7RTU4 235 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR4A16Q8NH70 328 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 LIN28AQ9H9Z2 209 aaKnown RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 NRIP3Q9NQ35 241 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 LANCL2Q9NS86 450 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 CSRP1P21291 193 aaKnown RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 GIPRP48546 466 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAC1P63000 192 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TCTN1Q2MV58 587 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 C1orf185Q5T7R7 199 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 HES5Q5TA89 166 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 BHLHA15Q7RTS1 189 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRR18Q8N4B5 295 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ARIH2OSQ8N7S6 290 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC37A3Q8NCC5 494 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TAAR8Q969N4 342 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMEM59Q9BXS4 323 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 RANBP3Q9H6Z4 567 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAB22AQ9UL26 194 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TRBV4-1A0A0J9YWV2 114 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 DCDC2BA2VCK2 349 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ACOD1A6NK06 481 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMPRSS11DO60235 418 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ADH4P08319 380 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 HOXC5Q00444 222 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 CDK5R2Q13319 367 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 DUSP7Q16829 419 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRAMEF9Q5VWM5 478 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 DPY19L4Q7Z388 723 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SULF2Q8IWU5 870 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ELMOD3Q96FG2 381 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC6A15Q9H2J7 730 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 UCKL1Q9NWZ5 548 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 RHBDD3Q9Y3P4 386 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 M0QZ24 198 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 WDR1O75083 606 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SNRPGP62308 76 aaKnown RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SHBQ15464 509 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TOMM34Q15785 309 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 RTL8BQ17RB0 113 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 GSG1Q2KHT4 349 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ELFN2Q5R3F8 820 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 PWWP2BQ6NUJ5 590 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 VASH2Q86V25 355 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 BEST3Q8N1M1 668 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 Q8N402 240 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 C17orf47Q8NEP4 570 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR52N1Q8NH53 320 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMEM255BQ8WV15 326 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 B3GALT1Q9Y5Z6 326 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 NDUFB3O43676 98 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 AKR1C4P17516 323 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 HTR2CP28335 458 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAB35Q15286 201 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 PAN3Q58A45 887 aaKnown RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 DCXRQ7Z4W1 244 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZDHHC23Q8IYP9 409 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC39A7Q92504 469 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 MIB2Q96AX9 1013 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 ST6GALNAC5Q9BVH7 336 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 NRSN2Q9GZP1 204 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC22A11Q9NSA0 550 aa8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 DIMT1Q9UNQ2 313 aaKnown RBP8.87□□□□□ -0.99
TNFRSF9-204ENST00000615230 A0A1W2PQF6 199 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 DNPH1O43598 174 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 NKX2-2O95096 273 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 IGFBP6P24592 240 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 RBP2P50120 134 aa8.86□□□□□ -0.99
TNFRSF9-204ENST00000615230 PPP1CAP62136 330 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms