RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PTP4A1Q93096 173 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 FAM71F1Q96KD3 344 aaPredicted RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 MSRAQ9UJ68 235 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 DDX60LQ5H9U9 1706 aaKnown RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 TSFMP43897 325 aaKnown RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 ZNF90Q03938 601 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 ST3GAL2Q16842 350 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 RSRP1Q9BUV0 290 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 ANKRD61A6NGH8 418 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 ZIC2O95409 532 aaPredicted RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 ZNF805Q5CZA5 627 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 ZNF789Q5FWF6 425 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 PDLIM5Q96HC4 596 aaKnown RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 GHRLQ9UBU3 117 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 GJE1A6NN92 205 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 PNPLA1Q8N8W4 532 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 CLEC1AQ8NC01 280 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 ADAMTS18Q8TE60 1221 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 MS4A10Q96PG2 267 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 SOD1P00441 154 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 JMJD7P0C870 316 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 S100A7P31151 101 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 ACTR1AP61163 376 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 INTS12Q96CB8 462 aaKnown RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
CHD1-212ENST00000614616 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
CHD1-212ENST00000614616 A0A1W2PPH5 198 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 ZNF320A2RRD8 509 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 LRP3O75074 770 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 LGI1O95970 557 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 NOVA1P51513 510 aaKnown RBP12.72□□□□□ -0.37
CHD1-212ENST00000614616 NHLH2Q02577 135 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 GSG1Q2KHT4 349 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 HYAL4Q2M3T9 481 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 TMEM65Q6PI78 240 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 PRR18Q8N4B5 295 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 DYRK2Q92630 601 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 ZNF845Q96IR2 970 aaPredicted RBP12.72□□□□□ -0.37
CHD1-212ENST00000614616 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 SSSCA1O60232 199 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 C5orf46Q6UWT4 87 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 CDRT4Q8N9R6 151 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 TMEM174Q8WUU8 243 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 NEURL3Q96EH8 262 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 TEX37Q96LM6 180 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 LIMK1P53667 647 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 OR7A5Q15622 319 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 FAM24BQ8N5W8 94 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 PIRO00625 290 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 CXCL14O95715 111 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 CLDN1O95832 211 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 SYT13Q7L8C5 426 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 GPR137Q96N19 417 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 GPR31O00270 319 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 FOXE1O00358 373 aaPredicted RBP12.72□□□□□ -0.37
CHD1-212ENST00000614616 TCF21O43680 179 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 ZNF28P17035 718 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 SPINT3P49223 89 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 SERTAD2Q14140 314 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 RNF111Q6ZNA4 994 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 CPXM2Q8N436 756 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 C5AR2Q9P296 337 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 FER1L5A0AVI2 2057 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 KIAA1551Q9HCM1 1747 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 ST8SIA3O43173 380 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 GALP22466 123 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 KIAA0319Q5VV43 1072 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 CYSLTR2Q9NS75 346 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 PARP14Q460N5 1801 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 DPP4P27487 766 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 FAM109BQ6ICB4 259 aaPredicted RBP12.72□□□□□ -0.37
CHD1-212ENST00000614616 CLSTN3Q9BQT9 956 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 HINT2Q9BX68 163 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 CDCP1Q9H5V8 836 aa12.72□□□□□ -0.37
CHD1-212ENST00000614616 A0A1W2PPQ1 181 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 MBTPS2O43462 519 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 DSC1Q08554 894 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 TUSC1Q2TAM9 212 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 COL5A1-AS1Q5SY13 56 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 TPGS2Q68CL5 300 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 SOX7Q9BT81 388 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 ALG12Q9BV10 488 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
CHD1-212ENST00000614616 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 FLVCR2Q9UPI3 526 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 SOCS6O14544 535 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 SLC31A2O15432 143 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 GPX8Q8TED1 209 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 DNAJA3Q96EY1 480 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 SH3BGRL2Q9UJC5 107 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 SIPA1L1O43166 1804 aa12.71□□□□□ -0.37
CHD1-212ENST00000614616 CASP8AP2Q9UKL3 1982 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms