RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 GUSBP11Q6P575 273 aa19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 OR10G6Q8NH81 332 aa19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 PEX11GQ96HA9 241 aa19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 TMEM138Q9NPI0 162 aa19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 SPHK1Q9NYA1 384 aa19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 UPB1Q9UBR1 384 aa19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 ZNF629Q9UEG4 869 aaPredicted RBP19.92■□□□□ 0.78
POLR2J3-220ENST00000613744 TMEM272A0A1B0GTI8 110 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 S100A9P06702 114 aaKnown RBP19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 MAKP20794 623 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 ACHEP22303 614 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 EDNRAP25101 427 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 FASLGP48023 281 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 MANEAQ5SRI9 462 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 GLT8D1Q68CQ7 371 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 OR4C16Q8NGL9 310 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 OR2L8Q8NGY9 312 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 ZG16BQ96DA0 208 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 MTHFD2LQ9H903 347 aaPredicted RBP19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 ICAM5Q9UMF0 924 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 TNFSF18Q9UNG2 199 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 A0A1W2PPV9 198 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 OR6C74A6NCV1 312 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 DUXAA6NLW8 204 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 PIN1P1O15428 100 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 GATCO43716 136 aaKnown RBP19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 CLEC3AO75596 197 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 GRK6P43250 576 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 ARHGDIBP52566 201 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 NR0B2Q15466 257 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 TMEM35AQ53FP2 167 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 FAM74A1Q5RGS3 127 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 TMEM88Q6PEY1 159 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 TMEM239Q8WW34 195 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 MS4A4EQ96PG1 132 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 ACTRT3Q9BYD9 372 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 SIGLEC7Q9Y286 467 aa19.91■□□□□ 0.78
POLR2J3-220ENST00000613744 EIF3GO75821 320 aaKnown RBP eCLIP19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 ACAA1P09110 424 aaPredicted RBP19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 AKAIN1P0CW23 69 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 SPP1P10451 314 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 OR1D5P58170 312 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 CRMP1Q14194 572 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 PCGF3Q3KNV8 242 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 NKAIN2Q5VXU1 208 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 ARHGAP11AQ6P4F7 1023 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 DBX2Q6ZNG2 339 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 CNN2Q99439 309 aaKnown RBP19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 PTDSS2Q9BVG9 487 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 SLITRK2Q9H156 845 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 PCDHB10Q9UN67 800 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 XRCC3O43542 346 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 THBS1P07996 1170 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 GLB1P16278 677 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 CSNK2A2P19784 350 aaPredicted RBP19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 SSR2P43308 183 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 HAAOP46952 286 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 STPG1Q5TH74 334 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 NUP43Q8NFH3 380 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 THAP6Q8TBB0 222 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 CCDC74AQ96AQ1 378 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 TCEAL7Q9BRU2 100 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 ZNF281Q9Y2X9 895 aa19.9■□□□□ 0.78
POLR2J3-220ENST00000613744 ASXL3Q9C0F0 2248 aa19.89■□□□□ 0.78
POLR2J3-220ENST00000613744 ZNF292O60281 2723 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 FGF16O43320 207 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 SPI1P17947 270 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 PAX6P26367 422 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 LUMP51884 338 aaPredicted RBP19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 ZNF136P52737 540 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 AMZ1Q400G9 498 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 ZNF813Q6ZN06 617 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 BEST3Q8N1M1 668 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 OR1J4Q8NGS1 313 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 SNX33Q8WV41 574 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 RSC1A1Q92681 617 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 TMEM185BQ9H7F4 350 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 TINAGQ9UJW2 476 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 RP1P56715 2156 aa19.89■□□□□ 0.77
POLR2J3-220ENST00000613744 SGCEO43556 437 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 NUDT21O43809 227 aaKnown RBP19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 PEBP1P30086 187 aaKnown RBP19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 HCCSP53701 268 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 SLC9A5Q14940 896 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 THSD4Q6ZMP0 1018 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 FRRS1Q6ZNA5 592 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 DND1Q8IYX4 353 aaKnown RBP19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 RNF122Q9H9V4 155 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 MKL2Q9ULH7 1088 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 A0A1B0GTI1 187 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 OR6C68A6NDL8 312 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 CRYBA1P05813 215 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 ADCYAP1P18509 176 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 BDKRB2P30411 391 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 CSF2RBP32927 897 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 RAB5BP61020 215 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 PPP1CAP62136 330 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 LY6G6FQ5SQ64 297 aa19.88■□□□□ 0.77
POLR2J3-220ENST00000613744 ZNF836Q6ZNA1 936 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms