RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 DGUOKQ16854 277 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 CDONQ4KMG0 1287 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 WIPI1Q5MNZ9 446 aaPredicted RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 DNM1P34Q6PK57 102 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 SSX6Q7RTT6 188 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 GPAT4Q86UL3 456 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 TIGD4Q8IY51 512 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 DYNC2LI1Q8TCX1 351 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 SNX33Q8WV41 574 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 C4orf36Q96KX1 117 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 RBP7Q96R05 134 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 INTS14Q96SY0 518 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 MDFIQ99750 246 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 HES7Q9BYE0 225 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 TSPAN10Q9H1Z9 355 aaPredicted RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 DCSTAMPQ9H295 470 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF703Q9H7S9 590 aaPredicted RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 EXOSC4Q9NPD3 245 aaKnown RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 MED29Q9NX70 200 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 SF3B6Q9Y3B4 125 aaKnown RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 TMEM14AQ9Y6G1 99 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 SPTBN2O15020 2390 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 PNMA8CA0A1B0GUJ8 204 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 TVP23AA6NH52 213 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF814B7Z6K7 855 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 TNFSF11O14788 317 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 TRAF3IP2O43734 574 aaPredicted RBP7.95□□□□□ -1.14
CCDC47-207ENST00000612558 HLA-DQA2P01906 255 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CTLA4P16410 223 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CELP19835 753 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 SDHBP21912 280 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 TGFBR1P36897 503 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 SERPINB10P48595 397 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CD97P48960 835 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 GFRA1P56159 465 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CARD18P57730 90 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 OR12D2P58182 307 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 RAC3P60763 192 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 GLO1Q04760 184 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 HYAL4Q2M3T9 481 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 SOWAHCQ53LP3 525 aaPredicted RBP7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CD200R1LQ6Q8B3 271 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 LRRC69Q6ZNQ3 347 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ESPNLQ6ZVH7 1005 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ASB18Q6ZVZ8 466 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 GALNTL5Q7Z4T8 443 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 KCTD20Q7Z5Y7 419 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CDC20BQ86Y33 519 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 RFLNBQ8N5W9 214 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ZFP41Q8N8Y5 198 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 SYT14Q8NB59 555 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 OR6X1Q8NH79 312 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ZFAND2BQ8WV99 257 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 SLC25A44Q96H78 314 aaPredicted RBP7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ADAD1Q96M93 576 aaKnown RBP7.95□□□□□ -1.14
CCDC47-207ENST00000612558 COQ7Q99807 217 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 MRPL13Q9BYD1 178 aaKnown RBP7.95□□□□□ -1.14
CCDC47-207ENST00000612558 TTTY12Q9BZ98 90 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC47-207ENST00000612558 WDR76Q9H967 626 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 QPCTLQ9NXS2 382 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 KLHL13Q9P2N7 655 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 ZMIZ1Q9ULJ6 1067 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 COPS3Q9UNS2 423 aa7.95□□□□□ -1.14
CCDC47-207ENST00000612558 DNAJC13O75165 2243 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 TRDV1A0A1B0GX56 115 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF726A6NNF4 738 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 EIF1AYO14602 144 aaKnown RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 PHYHO14832 338 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 PLPP2O43688 288 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 TLX3O43711 291 aaPredicted RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 RAMP1O60894 148 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 KHDRBS3O75525 346 aaKnown RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 CLPXO76031 633 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 GLSO94925 669 aaPredicted RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 IGHG1P01857 330 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 HLA-DPB1P04440 258 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 POU3F2P20265 443 aaPredicted RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 GALP22466 123 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 FGF9P31371 208 aaPredicted RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 MEOX1P50221 254 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 GBX2P52951 348 aaPredicted RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 CLDN20P56880 219 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
CCDC47-207ENST00000612558 PLGLB1Q02325 96 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 POU4F3Q15319 338 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 TRAM1Q15629 374 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 ETFDHQ16134 617 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 DEFB109BQ30KR1 87 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 TP53I3Q53FA7 332 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF766Q5HY98 468 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 THEM4Q5T1C6 240 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 HBMQ6B0K9 141 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 VASNQ6EMK4 673 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 IGFL2Q6UWQ7 119 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 PLEKHG7Q6ZR37 379 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 GGNQ86UU5 652 aa7.94□□□□□ -1.14
CCDC47-207ENST00000612558 TMEM178AQ8NBL3 297 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms