RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MPP4Q96JB8 637 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 APOL4Q9BPW4 351 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 CACNG6Q9BXT2 260 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 TMEM27Q9HBJ8 222 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 SLC17A5Q9NRA2 495 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 MYRFQ9Y2G1 1151 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 AMDHD2Q9Y303 409 aa19.03■□□□□ 0.64
CBWD3-207ENST00000611426 SONP18583 2426 aaKnown RBP19.02■□□□□ 0.64
CBWD3-207ENST00000611426 KIAA1324LA8MWY0 1029 aaPredicted RBP19.02■□□□□ 0.64
CBWD3-207ENST00000611426 CHP2O43745 196 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 OSMP13725 252 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 EPHA2P29317 976 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 MPGP29372 298 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 GGT2P36268 569 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 RBM34P42696 430 aaKnown RBP19.02■□□□□ 0.64
CBWD3-207ENST00000611426 TEKQ02763 1124 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 MUC15Q8N387 334 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 POMGNT2Q8NAT1 580 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 ZNF385AQ96PM9 386 aaKnown RBP19.02■□□□□ 0.64
CBWD3-207ENST00000611426 RHNO1Q9BSD3 238 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 GMPPBQ9Y5P6 360 aa19.02■□□□□ 0.64
CBWD3-207ENST00000611426 CR1P17927 2039 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 FPR3P25089 353 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 OMPP47874 163 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 C1orf140Q5VVS0 124 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 C11orf71Q6IPW1 123 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 ZNF730Q6ZMV8 503 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 NKAIN4Q8IVV8 208 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 HDAC2Q92769 488 aaKnown RBP19.01■□□□□ 0.63
CBWD3-207ENST00000611426 FKRPQ9H9S5 495 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 SLC7A7Q9UM01 511 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 ATP23Q9Y6H3 246 aa19.01■□□□□ 0.63
CBWD3-207ENST00000611426 ANK3Q12955 4377 aaKnown RBP19.01■□□□□ 0.63
CBWD3-207ENST00000611426 ABCA1O95477 2261 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 A0A1B0GWA3 101 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 TRIM64CA6NLI5 447 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 ZAR1LA6NP61 321 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 CRLF1O75462 422 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 KRT33AO76009 404 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 VAMP5O95183 116 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 SMIM18P0DKX4 95 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 NUDT6P53370 316 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 CRISP1P54107 249 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 PRPS1P60891 318 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 CXCR4P61073 352 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 CD47Q08722 323 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 TSPAN31Q12999 210 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 APOFQ13790 326 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 RAB35Q15286 201 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 C1QTNF12Q5T7M4 302 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 TTC33Q6PID6 262 aaPredicted RBP19■□□□□ 0.63
CBWD3-207ENST00000611426 KLHL24Q6TFL4 600 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 LINC00114Q6XXX2 140 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 B3GLCTQ6Y288 498 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 ABHD12BQ7Z5M8 362 aaPredicted RBP19■□□□□ 0.63
CBWD3-207ENST00000611426 GNPDA2Q8TDQ7 276 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 DNAJA4Q8WW22 397 aaPredicted RBP19■□□□□ 0.63
CBWD3-207ENST00000611426 ZNF566Q969W8 418 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 C3orf49Q96BT1 292 aa19■□□□□ 0.63
CBWD3-207ENST00000611426 KRCC1Q9NPI7 259 aaPredicted RBP19■□□□□ 0.63
CBWD3-207ENST00000611426 HTR3EA5X5Y0 456 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 WNT11O96014 354 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 RBM48Q5RL73 367 aaKnown RBP18.99■□□□□ 0.63
CBWD3-207ENST00000611426 ZNF544Q6NX49 715 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 TMEM154Q6P9G4 183 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 ULK3Q6PHR2 472 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 CLDN22Q8N7P3 220 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 C12orf10Q9HB07 376 aa18.99■□□□□ 0.63
CBWD3-207ENST00000611426 IGF2P01344 180 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 P2RY4P51582 365 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 IL1RL1Q01638 556 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 TOP3AQ13472 1001 aaPredicted RBP18.98■□□□□ 0.63
CBWD3-207ENST00000611426 HIKESHIQ53FT3 197 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 C6orf141Q5SZD1 244 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 WDR88Q6ZMY6 472 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 RASSF6Q6ZTQ3 369 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 CREB3L2Q70SY1 520 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 ZNF786Q8N393 782 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 STK35Q8TDR2 534 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 TMEM5Q9Y2B1 443 aa18.98■□□□□ 0.63
CBWD3-207ENST00000611426 CHD3Q12873 2000 aaKnown RBP18.97■□□□□ 0.63
CBWD3-207ENST00000611426 NPIPB7O75200 414 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 AHSA1O95433 338 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 CCDC159P0C7I6 412 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 BMP4P12644 408 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 SELENOPP49908 381 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 DSCR9P59020 149 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 TUBA4AP68366 448 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 PRKCDQ05655 676 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 MAD2L1BPQ15013 274 aaPredicted RBP18.97■□□□□ 0.63
CBWD3-207ENST00000611426 SLX4IPQ5VYV7 408 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 LAIR2Q6ISS4 152 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 CLEC2AQ6UVW9 174 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 RRM2BQ7LG56 351 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 TMEM255BQ8WV15 326 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 TMEM239Q8WW34 195 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 HTRA1Q92743 480 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 SLC25A36Q96CQ1 311 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 MDFIQ99750 246 aa18.97■□□□□ 0.63
CBWD3-207ENST00000611426 GPA33Q99795 319 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms