RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 LILRB4Q8NHJ6 448 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 ABHD16AO95870 558 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 APEHP13798 732 aaKnown RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 ABOP16442 354 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 IL32P24001 234 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 EXT1Q16394 746 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 PRTGQ2VWP7 1150 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 YOD1Q5VVQ6 348 aaPredicted RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 OVCH1Q7RTY7 1134 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC25A43Q8WUT9 341 aaPredicted RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 PIGTQ969N2 578 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 TMEFF2Q9UIK5 374 aaPredicted RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 CCDC163A0A0D9SF12 145 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 SMLR1H3BR10 107 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 WNT3P56703 355 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 RPL18Q07020 188 aaKnown RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 TSSK2Q96PF2 358 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 WSB2Q9NYS7 404 aaPredicted RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 KCNE3Q9Y6H6 103 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 KCNE1BA0A087WTH5 132 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 OR2W5A6NFC9 320 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 OPCMLQ14982 345 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 AGERQ15109 404 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 ZNF346Q9UL40 294 aaKnown RBP13.04□□□□□ -0.32
PCDHB16-201ENST00000609684 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC34A2O95436 690 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 CD160O95971 181 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 NAGAP17050 411 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SOX18P35713 384 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 EMDP50402 254 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 HSF1Q00613 529 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 FABP5Q01469 135 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 IKZF1Q13422 519 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 PGAP1Q75T13 922 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 HMGCLL1Q8TB92 370 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 C8orf44Q96CB5 159 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 LAT2Q9GZY6 243 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SH3BGRL2Q9UJC5 107 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 HSPB6O14558 160 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SULT1B1O43704 296 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 CISD3P0C7P0 127 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 CPT2P23786 658 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 RPS27P42677 84 aaKnown RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 CYB561P49447 251 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 MAP2K6P52564 334 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 ZNF529Q6P280 563 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 FBXW12Q6X9E4 464 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 ARIH2OSQ8N7S6 290 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 GJC3Q8NFK1 279 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SEC22CQ9BRL7 303 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 PRDM7Q9NQW5 492 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 LRFN1Q9P244 771 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 CBX7O95931 251 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 NFYAP23511 347 aaPredicted RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 IL2RGP31785 369 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 PMPCAQ10713 525 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 FAM53BQ14153 422 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 GLIPR1L1Q6UWM5 242 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SYT9Q86SS6 491 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 ANGPTL5Q86XS5 388 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 KLHDC8BQ8IXV7 354 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 OR13C5Q8NGS8 318 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SNX18Q96RF0 628 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SIRT5Q9NXA8 310 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 RAB22AQ9UL26 194 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 TMEM221A6NGB7 291 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 C2CD4DB7Z1M9 353 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 NRG2O14511 850 aaPredicted RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 NUPL2O15504 423 aaKnown RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 PRAMEF4O60810 478 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 RPS27AP62979 156 aaKnown RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 HTR4Q13639 388 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 Q6ZS52 159 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 OR4D6Q8NGJ1 314 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SLC7A6Q92536 515 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SLCO5A1Q9H2Y9 848 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 CHST11Q9NPF2 352 aa13.03□□□□□ -0.32
PCDHB16-201ENST00000609684 SPTY2D1-AS1A0A0U1RR47 76 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 B8ZZF3 427 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 FBXO24O75426 580 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 SMAD4Q13485 552 aaKnown RBP13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 ARSJQ5FYB0 599 aaPredicted RBP13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 NT5CQ8TCD5 201 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 MCRIP1C9JLW8 97 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 GPR171O14626 319 aa13.02□□□□□ -0.32
PCDHB16-201ENST00000609684 GABRG2P18507 467 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms