RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 GABRG2P18507 467 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CD52P31358 61 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 SRP14P37108 136 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 MAGEA8P43361 318 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CASP9P55211 416 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 BPIFB3P59826 476 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 STX1BP61266 288 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 TSPY1Q01534 308 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 EMX1Q04741 257 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 TCP10Q12799 353 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 TSTA3Q13630 321 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 PSMD5Q16401 504 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 FILIP1LQ4L180 1135 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 RIPPLY2Q5TAB7 128 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 SLC8B1Q6J4K2 584 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 WDR59Q6PJI9 974 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 RGS9BPQ6ZS82 235 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ZNF621Q6ZSS3 439 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 PAQR9Q6ZVX9 377 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 LRRC70Q7Z2Q7 622 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 EFL1Q7Z2Z2 1120 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 ACOT1Q86TX2 421 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 YRDCQ86U90 279 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 TMEM86BQ8N661 226 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 FAM86B1Q8N7N1 296 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 C15orf54Q8N8G6 183 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 C15orf56Q8N910 161 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GPATCH11Q8N954 259 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DENND6BQ8NEG7 585 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 OR4D9Q8NGE8 314 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 OR2T3Q8NH03 318 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ITFG1Q8TB96 612 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 SCFD1Q8WVM8 642 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 MRPS31Q92665 395 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 RNASE6Q93091 150 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 MR1Q95460 341 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ISOC1Q96CN7 298 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DTNBP1Q96EV8 351 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CFAP53Q96M91 514 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 NOL4LQ96MY1 436 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 ZFP3Q96NJ6 502 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GSDMAQ96QA5 445 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DOK1Q99704 481 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 BAG1Q99933 345 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 BBS2Q9BXC9 721 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GCOM2Q9BZD3 368 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 POLR3FQ9H1D9 316 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 AZI2Q9H6S1 392 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 VAT1LQ9HCJ6 419 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ASF1BQ9NVP2 202 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 COMMD8Q9NX08 183 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ZNF226Q9NYT6 803 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DEC1Q9P2X7 70 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 SEC14L3Q9UDX4 400 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 PISDQ9UG56 409 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GNPTGQ9UJJ9 305 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ADAM28Q9UKQ2 775 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 FKBP7Q9Y680 259 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ATG2AQ2TAZ0 1938 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 NCOA6Q14686 2063 aaPredicted RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 ANK1P16157 1881 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DOCK6Q96HP0 2047 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 INTS1Q8N201 2190 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 SHANK1Q9Y566 2161 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 LAMA4Q16363 1823 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 SCN8AQ9UQD0 1980 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 MYH7BA7E2Y1 1941 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DYSFO75923 2080 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 TRAV19A0A0A6YYK7 116 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 FAM170AA1A519 330 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GOLGA6L10A6NI86 522 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 C10orf142B7Z368 130 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GOLGA6L19H0YKK7 550 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 BCKDKO14874 412 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 ALOX15BO15296 676 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 FIBPO43427 364 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 PPIHO43447 177 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 SLC19A2O60779 497 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 DKC1O60832 514 aaKnown RBP eCLIP0.32□□□□□ -2.36
CEP290-208ENST00000604024 RAMP3O60896 148 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CIAO1O76071 339 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 IFNA14P01570 189 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 OPN1MWP04001 364 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 IFNA6P05013 189 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 LGALS2P05162 132 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CHRNGP07510 517 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 OPN1MW2P0DN77 364 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 OPN1MW3P0DN78 364 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 HSPD1P10809 573 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 CCDC130P13994 396 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 GABRA1P14867 456 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 PAX7P23759 505 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CNTFRP26992 372 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CCND2P30279 289 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 AKT2P31751 481 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 QARSP47897 775 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 SLC11A1P49279 550 aa0.32□□□□□ -2.36
CEP290-208ENST00000604024 CSNK1EP49674 416 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 NLRP11P59045 1033 aaKnown RBP0.32□□□□□ -2.36
CEP290-208ENST00000604024 ST8SIA6P61647 398 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms