RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 THEM4Q5T1C6 240 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 OR2T5Q6IEZ7 315 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 SLC25A47Q6Q0C1 308 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 SMARCD3Q6STE5 483 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 FAM122BQ7Z309 247 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 LURAP1LQ8IV03 231 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 LINC00471Q8N535 108 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 IL17RDQ8NFM7 739 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 OR2T29Q8NH02 315 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 GNPDA2Q8TDQ7 276 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 Q96M85 177 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF570Q96NI8 536 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 GPX7Q96SL4 187 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-215ENST00000601150 GSX2Q9BZM3 304 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 SEC61A2Q9H9S3 476 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 NOX3Q9HBY0 568 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF701Q9NV72 531 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-215ENST00000601150 ZNF224Q9NZL3 707 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 FBXL3Q9UKT7 428 aa14.65□□□□□ -0.06
TRIM28-215ENST00000601150 XKRYO14609 159 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 GSC2O15499 205 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 MGRN1O60291 552 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 RAB36O95755 333 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 PAX1P15863 534 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 HOXB6P17509 224 aaKnown RBP14.64□□□□□ -0.07
TRIM28-215ENST00000601150 TTKP33981 857 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 GSSP48637 474 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 PTDSS1P48651 473 aaKnown RBP14.64□□□□□ -0.07
TRIM28-215ENST00000601150 PTH2RP49190 550 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 FABP6P51161 128 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 FXYD6P3P58550 94 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 RAB1AP62820 205 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 MRPS34P82930 218 aaKnown RBP14.64□□□□□ -0.07
TRIM28-215ENST00000601150 FLOT2Q14254 428 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 AGAP6Q5VW22 663 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 GPR139Q6DWJ6 353 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 ZNF544Q6NX49 715 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 C1orf94Q6P1W5 598 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 THSD4Q6ZMP0 1018 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 DPY19L2P2Q6ZN68 376 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 DPPA2Q7Z7J5 298 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 DTX2Q86UW9 622 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 MYPOPQ86VE0 399 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-215ENST00000601150 ADGRG5Q8IZF4 528 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 FBXL14Q8N1E6 418 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 CLDN22Q8N7P3 220 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 OR4C15Q8NGM1 316 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 FANK1Q8TC84 345 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 NSMAFQ92636 917 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 PERPQ96FX8 193 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 SH3GL3Q99963 347 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 TRAF4Q9BUZ4 470 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-215ENST00000601150 CADM1Q9BY67 442 aaKnown RBP14.64□□□□□ -0.07
TRIM28-215ENST00000601150 GRIP2Q9C0E4 1043 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 REEP1Q9H902 201 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 NRIP3Q9NQ35 241 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 POMPQ9Y244 141 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 UGT2A1Q9Y4X1 527 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 ITPR3Q14573 2671 aa14.64□□□□□ -0.07
TRIM28-215ENST00000601150 ARID1AO14497 2285 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 IGKV1D-43A0A0B4J1Z2 117 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 TEX13CA0A0J9YWL9 993 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 DHRS12A0PJE2 317 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 OVOL3O00110 214 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 AHCYL1O43865 530 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 CCNB2O95067 398 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 ZNF14P17017 642 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-215ENST00000601150 NPR2P20594 1047 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 CALCRP30988 508 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 SDHAP31040 664 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 GIPRP48546 466 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 TSPAN31Q12999 210 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 KRR1Q13601 381 aaKnown RBP14.63□□□□□ -0.07
TRIM28-215ENST00000601150 MESTQ5EB52 335 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 SHEQ5VZ18 495 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 TMEM53Q6P2H8 277 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 PGBD2Q6P3X8 592 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 SLC16A14Q7RTX9 510 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 OR4F15Q8NGB8 312 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 FGFBP3Q8TAT2 258 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 HTRA1Q92743 480 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 GTPBP3Q969Y2 492 aaKnown RBP14.63□□□□□ -0.07
TRIM28-215ENST00000601150 RASD2Q96D21 266 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 ZNF75AQ96N20 296 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 SIAEQ9HAT2 523 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 IL20RAQ9UHF4 553 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 SAMHD1Q9Y3Z3 626 aaKnown RBP14.63□□□□□ -0.07
TRIM28-215ENST00000601150 IER3IP1Q9Y5U9 82 aa14.63□□□□□ -0.07
TRIM28-215ENST00000601150 AKAP9Q99996 3911 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 IGHV2OR16-5A0A0B4J2B6 119 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 SLC22A23A1A5C7 686 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 PRSS37A4D1T9 235 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 H7C1C5 153 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 CD8AP01732 235 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 PATE4P0C8F1 98 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 APEHP13798 732 aaKnown RBP14.62□□□□□ -0.07
TRIM28-215ENST00000601150 SLC6A6P31641 620 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 APOBEC3AP31941 199 aaPredicted RBP14.62□□□□□ -0.07
TRIM28-215ENST00000601150 CDAP32320 146 aa14.62□□□□□ -0.07
TRIM28-215ENST00000601150 RPS6KA3P51812 740 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms