RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ARIH2OSQ8N7S6 290 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 NSMAFQ92636 917 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 Q96M85 177 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 ZNF570Q96NI8 536 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 RBP7Q96R05 134 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 SH3GL3Q99963 347 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 TRAF4Q9BUZ4 470 aaPredicted RBP12.04□□□□□ -0.48
UPF1-205ENST00000598209 GSX2Q9BZM3 304 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 SMURF2Q9HAU4 748 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 GRHPRQ9UBQ7 328 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 LYVE1Q9Y5Y7 322 aa12.04□□□□□ -0.48
UPF1-205ENST00000598209 AQP12BA6NM10 295 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 H7C1C5 153 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 OVOL3O00110 214 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 TNFRSF11BO00300 401 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 ARHGEF9O43307 516 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 RAB36O95755 333 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 CD8AP01732 235 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 PATE4P0C8F1 98 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 PAX1P15863 534 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 FPR3P25089 353 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 CALCRP30988 508 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 TTKP33981 857 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 GIPRP48546 466 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 PTDSS1P48651 473 aaKnown RBP12.03□□□□□ -0.48
UPF1-205ENST00000598209 PTH2RP49190 550 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 FABP6P51161 128 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 HMGA2P52926 109 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 FXYD6P3P58550 94 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 LCN6P62502 163 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 RAB1AP62820 205 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 ADAM8P78325 824 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 NRN1LQ496H8 165 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 THEM4Q5T1C6 240 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 AGAP6Q5VW22 663 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 SHEQ5VZ18 495 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 ZNF544Q6NX49 715 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 SMARCD3Q6STE5 483 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 THSD4Q6ZMP0 1018 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 KRTAP1-3Q8IUG1 177 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 AQP12AQ8IXF9 295 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 FBXL14Q8N1E6 418 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 FNDC8Q8TC99 324 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 GNPDA2Q8TDQ7 276 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
UPF1-205ENST00000598209 ZNF75AQ96N20 296 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 GPX7Q96SL4 187 aaPredicted RBP12.03□□□□□ -0.48
UPF1-205ENST00000598209 DENND2DQ9H6A0 471 aaPredicted RBP12.03□□□□□ -0.48
UPF1-205ENST00000598209 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
UPF1-205ENST00000598209 IL20RAQ9UHF4 553 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 UGT2A1Q9Y4X1 527 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 ARFGEF3Q5TH69 2177 aa12.03□□□□□ -0.48
UPF1-205ENST00000598209 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 IGHV2OR16-5A0A0B4J2B6 119 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 TEX13CA0A0J9YWL9 993 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 XKRYO14609 159 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 GSC2O15499 205 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 RAP2AP10114 183 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 ZNF14P17017 642 aaPredicted RBP12.02□□□□□ -0.49
UPF1-205ENST00000598209 CDAP32320 146 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 CDKN1AP38936 164 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 GSSP48637 474 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 MRPS34P82930 218 aaKnown RBP12.02□□□□□ -0.49
UPF1-205ENST00000598209 PPP1R8Q12972 351 aaKnown RBP12.02□□□□□ -0.49
UPF1-205ENST00000598209 KRR1Q13601 381 aaKnown RBP12.02□□□□□ -0.49
UPF1-205ENST00000598209 FLOT2Q14254 428 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 MESTQ5EB52 335 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 Q5PR19 223 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 GPR139Q6DWJ6 353 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 OR2T5Q6IEZ7 315 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 C1orf94Q6P1W5 598 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 SLC16A14Q7RTX9 510 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 ADGRG5Q8IZF4 528 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 MUC15Q8N387 334 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 WFDC11Q8NEX6 87 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 OR4F15Q8NGB8 312 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 OR9Q2Q8NGE9 314 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 OR4C15Q8NGM1 316 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 OR2T29Q8NH02 315 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 FANK1Q8TC84 345 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 RASD2Q96D21 266 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 CADM1Q9BY67 442 aaKnown RBP12.02□□□□□ -0.49
UPF1-205ENST00000598209 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 OR52D1Q9H346 318 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 NRIP3Q9NQ35 241 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 CBLN4Q9NTU7 201 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 VNN3Q9NY84 501 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 IER3IP1Q9Y5U9 82 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
UPF1-205ENST00000598209 DHRS12A0PJE2 317 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 MGRN1O60291 552 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 ATP5HO75947 161 aa12.01□□□□□ -0.49
UPF1-205ENST00000598209 CCNB2O95067 398 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms